Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5061 and GFF5062 overlap by 1 nucleotidesGFF5062 and GFF5063 are separated by 1 nucleotidesGFF5063 and GFF5064 are separated by 39 nucleotidesGFF5064 and GFF5065 are separated by 12 nucleotides GFF5061 - Aspartyl-tRNA(Asn) amidotransferase subunit C (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit C (EC 6.3.5.7), at 163,358 to 163,657 GFF5061 GFF5062 - Aspartyl-tRNA(Asn) amidotransferase subunit A (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit A (EC 6.3.5.7), at 163,657 to 165,171 GFF5062 GFF5063 - Aspartyl-tRNA(Asn) amidotransferase subunit B (EC 6.3.5.6) @ Glutamyl-tRNA(Gln) amidotransferase subunit B (EC 6.3.5.7), at 165,173 to 166,663 GFF5063 GFF5064 - Exonuclease SbcC, at 166,703 to 167,392 GFF5064 GFF5065 - Orotate phosphoribosyltransferase (EC 2.4.2.10), at 167,405 to 168,088 GFF5065
Group Condition GFF5061 GFF5062 GFF5063 GFF5064 GFF5065
complex community Community=arabino-guar; Passage=4 N.D. N.D. N.D. -0.2 -3.3
complex community Community=arabino-guar; Passage=4 N.D. N.D. N.D. +0.0 -3.1
complex community Community=arabino-guar; Passage=4 N.D. N.D. N.D. +0.2 -3.1
complex community Community=guar; Passage=4 N.D. N.D. N.D. +0.2 -3.0
complex community Community=Kojac gum; Passage=4 N.D. N.D. N.D. +0.3 -2.9
complex community Community=arabino-guar; Passage=4 N.D. N.D. N.D. +0.3 -3.0
phage phage_bap4 N.D. N.D. N.D. +0.0 -2.7
phage phage_bap4 N.D. N.D. N.D. +0.1 -2.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. N.D. -0.5 -2.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. N.D. -0.3 -2.3
phage phage_bap4 N.D. N.D. N.D. +0.2 -2.7
no phage control no phage control N.D. N.D. N.D. +0.2 -2.7
no phage control no phage control N.D. N.D. N.D. +0.3 -2.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. N.D. -0.3 -2.2
no phage control no phage control N.D. N.D. N.D. +0.3 -2.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. N.D. -0.2 -2.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. N.D. -0.3 -2.2
complex community Community=guar; Passage=4 N.D. N.D. N.D. +0.8 -3.2
complex community Community=guar; Passage=4 N.D. N.D. N.D. +0.9 -3.2
complex community Community=guar; Passage=4 N.D. N.D. N.D. +0.7 -2.9
phage phage_bap4 N.D. N.D. N.D. +0.4 -2.7
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. N.D. +0.2 -2.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +0.7 -2.7
phage phage_bap4 N.D. N.D. N.D. +0.7 -2.7
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. N.D. +0.2 -2.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +1.1 -3.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. N.D. +0.3 -2.2
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +1.2 -3.0
complex community Community=Locust bean gum; Passage=4 N.D. N.D. N.D. +1.0 -2.8
phage phage_bap4 N.D. N.D. N.D. +0.6 -2.2
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