Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF504 and GFF505 are separated by 44 nucleotidesGFF505 and GFF506 are separated by 46 nucleotidesGFF506 and GFF507 are separated by 3 nucleotidesGFF507 and GFF508 overlap by 4 nucleotides GFF504 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 171,165 to 172,331 GFF504 GFF505 - Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1), at 172,376 to 173,542 GFF505 GFF506 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 173,589 to 175,445 GFF506 GFF507 - Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1), at 175,449 to 176,237 GFF507 GFF508 - Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1), at 176,234 to 177,061 GFF508
Group Condition GFF504 GFF505 GFF506 GFF507 GFF508
carbon source Ying_OrganicAcid7 rep A; time point 2 +0.2 -0.0 -0.1 -0.3 N.D.
carbon source Ying_all64 rep B; time point 1 +0.2 -0.1 +0.2 -0.5 N.D.
carbon source Ying_Others16 rep C; time point 2 -0.3 -0.0 +0.1 -0.1 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 2 -0.1 +0.1 +0.1 -0.3 N.D.
carbon source Ying_all64 rep A; time point 3 -0.3 +0.1 -0.0 +0.1 N.D.
carbon source Ying_all64 rep B; time point 2 +0.0 +0.0 +0.3 -0.4 N.D.
carbon source Ying_Others16 rep C; time point 1 +0.1 +0.1 -0.1 -0.1 N.D.
carbon source Ying_Nucleobase14 rep B; time point 1 +0.1 +0.2 -0.3 +0.1 N.D.
carbon source Ying_sugar7 rep A; time point 1 +0.2 -0.0 +0.1 -0.1 N.D.
carbon source Ying_all64 rep B; time point 3 -0.0 -0.1 -0.1 +0.4 N.D.
carbon source Ying_sugar7 rep C; time point 3 -0.1 +0.2 +0.2 -0.0 N.D.
carbon source Ying_Nucleobase14 rep C; time point 1 -0.1 +0.0 -0.1 +0.3 N.D.
carbon source Ying_sugar7 rep C; time point 1 +0.2 +0.0 +0.3 -0.3 N.D.
carbon source Ying_sugar7 rep B; time point 2 +0.4 +0.1 -0.0 -0.1 N.D.
carbon source Ying_Others16 rep B; time point 3 -0.0 +0.0 +0.3 +0.1 N.D.
carbon source Ying_sugar7 rep A; time point 2 +0.3 +0.1 +0.2 -0.1 N.D.
carbon source Ying_all64 rep C; time point 2 -0.1 -0.1 -0.2 +0.9 N.D.
carbon source Ying_OrganicAcid7 rep B; time point 1 +0.2 -0.0 +0.1 +0.1 N.D.
carbon source Ying_AminoAcid20 rep A; time point 1 +0.1 +0.1 +0.1 +0.1 N.D.
carbon source Ying_Others16 rep B; time point 1 +0.2 +0.3 +0.0 +0.0 N.D.
carbon source Ying_sugar7 rep B; time point 3 -0.1 +0.2 +0.3 +0.2 N.D.
carbon source Ying_OrganicAcid7 rep C; time point 3 +0.1 +0.0 +0.2 +0.3 N.D.
carbon source Ying_AminoAcid20 rep A; time point 3 -0.1 +0.1 +0.3 +0.3 N.D.
carbon source Ying_AminoAcid20 rep B; time point 1 +0.1 +0.2 +0.0 +0.3 N.D.
carbon source Ying_AminoAcid20 rep A; time point 2 +0.2 +0.2 +0.1 +0.2 N.D.
carbon source Ying_all64 rep A; time point 1 +0.0 +0.1 +0.1 +0.4 N.D.
carbon source Ying_Nucleobase14 rep C; time point 2 +0.1 +0.2 +0.1 +0.3 N.D.
carbon source Ying_all64 rep A; time point 2 -0.0 +0.1 +0.2 +0.3 N.D.
carbon source Ying_all64 rep C; time point 3 -0.1 -0.1 +0.0 +1.0 N.D.
carbon source Ying_Others16 rep A; time point 3 +0.1 +0.5 +0.4 +1.0 N.D.
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