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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF5057 and GFF5058 are separated by 259 nucleotides
GFF5058 and GFF5059 overlap by 4 nucleotides
GFF5059 and GFF5060 are separated by 319 nucleotides
GFF5060 and GFF5061 overlap by 8 nucleotides
GFF5057 - Mobile element protein, at 5,054,643 to 5,055,482
GFF5057
GFF5058 - hypothetical protein, at 5,055,742 to 5,055,864
GFF5058
GFF5059 - Integrase-like protein, at 5,055,861 to 5,057,063
GFF5059
GFF5060 - Truncated hemoglobins-like protein, at 5,057,383 to 5,057,862
GFF5060
GFF5061 - hypothetical protein, at 5,057,855 to 5,058,130
GFF5061
Group
Condition
GFF5057
GFF5058
GFF5059
GFF5060
GFF5061
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.1
+0.2
+0.3
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.4
+0.3
+0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.1
+0.3
+0.2
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.3
+0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
+0.6
+0.3
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
+0.4
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.7
+0.4
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.5
+0.3
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.9
+0.5
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.4
+0.3
+0.1
+0.5
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.6
+0.2
-0.1
+0.6
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.5
+0.2
+0.0
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.5
+0.4
+0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.5
+0.6
+0.0
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.2
+0.4
+0.6
+0.1
+0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.6
+0.4
-0.1
+0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.7
+0.4
+0.3
+0.7
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+1.3
+0.3
+0.2
+0.7
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