Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF503 and GFF504 overlap by 4 nucleotidesGFF504 and GFF505 are separated by 24 nucleotidesGFF505 and GFF506 are separated by 126 nucleotidesGFF506 and GFF507 are separated by 62 nucleotides GFF503 - Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1), at 545,523 to 546,554 GFF503 GFF504 - SAM-dependent methyltransferases, at 546,551 to 547,399 GFF504 GFF505 - no description, at 547,424 to 547,996 GFF505 GFF506 - hypothetical protein, at 548,123 to 548,629 GFF506 GFF507 - Hydrolase, alpha/beta fold family, at 548,692 to 549,585 GFF507
Group Condition GFF503 GFF504 GFF505 GFF506 GFF507
complex community Community=arabino-guar; Passage=4 N.D. -0.8 +0.2 -2.9 -0.3
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 +0.1 -1.9 -0.1
complex community Community=Kojac gum; Passage=4 N.D. -0.3 +0.4 -2.1 +0.4
phage phage_bap4 N.D. -0.2 -0.0 -1.4 -0.1
phage phage_bap4 N.D. +0.0 +0.0 -1.7 +0.1
complex community Community=guar; Passage=4 N.D. -0.0 +0.2 -1.5 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 +0.2 -1.7 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. -0.2 +0.2 -1.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 +0.1 -1.2 +0.1
phage phage_bap4 N.D. +0.0 +0.0 -1.0 -0.1
phage phage_bap4 N.D. -0.2 -0.1 -0.7 +0.0
phage phage_bap4 N.D. -0.0 -0.1 -0.7 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.2 +0.0 -0.6 +0.1
no phage control no phage control N.D. +0.0 -0.1 -0.8 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 +0.1 -0.7 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 +0.1 -0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.0 -0.4 -0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.0 +0.0 -0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 -0.1 -0.4 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.0 -0.5 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.0 +0.1 -0.5 +0.2
complex community Community=guar; Passage=4 N.D. -0.0 +0.2 -0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.2 +0.0 +0.5 -0.0
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 +0.3 +0.5 +0.0
complex community Community=arabino-guar; Passage=4 N.D. +0.1 +0.2 +0.5 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. -0.1 +0.2 +0.4 +0.1
complex community Community=arabino-guar; Passage=4 N.D. -0.0 -0.0 +0.8 +0.0
complex community Community=Locust bean gum; Passage=4 N.D. +0.7 +0.2 -0.0 +0.1
complex community Community=arabino-guar; Passage=4 N.D. +0.5 +0.1 +0.2 +0.5
complex community Community=Locust bean gum; Passage=4 N.D. +0.3 +0.1 +0.5 +0.3
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