Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5043 and GFF5044 are separated by 4 nucleotidesGFF5044 and GFF5045 are separated by 16 nucleotidesGFF5045 and GFF5046 are separated by 18 nucleotidesGFF5046 and GFF5047 are separated by 28 nucleotides GFF5043 - ABC transporter, permease protein (cluster 9, phospholipid), at 144,932 to 146,098 GFF5043 GFF5044 - ABC transporter, ATP-binding protein (cluster 9, phospholipid), at 146,103 to 146,948 GFF5044 GFF5045 - ABC transporter, substrate-binding protein (cluster 9, phospholipid), at 146,965 to 147,924 GFF5045 GFF5046 - putative lipoprotein, at 147,943 to 148,656 GFF5046 GFF5047 - hypothetical protein, at 148,685 to 148,906 GFF5047
Group Condition GFF5043 GFF5044 GFF5045 GFF5046 GFF5047
complex community Community=arabino-guar; Passage=4 +0.1 -1.1 -0.7 -0.2 -1.7
complex community Community=guar; Passage=4 -0.1 -0.6 -0.3 -0.4 -0.8
phage phage_bap4 +0.1 -0.7 -0.5 +0.3 -0.2
complex community Community=arabino-guar; Passage=4 +0.1 -2.2 +0.2 +0.5 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.4 -0.5 +0.3 -0.1
complex community Community=guar; Passage=4 +0.2 -0.1 -0.1 +0.1 -0.9
phage phage_bap4 -0.0 -1.0 +0.2 +0.1 +0.1
phage phage_bap4 +0.0 -0.6 -0.2 +0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 -0.2 -0.9 +0.6 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 -0.9 -0.0 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 -0.4 -0.1 +0.3 -0.3
no phage control no phage control +0.1 -0.6 +0.1 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 -0.3 +0.2 +0.3 -0.3 -0.0
complex community Community=Locust bean gum; Passage=4 -0.2 +0.7 +0.2 +0.1 -0.7
complex community Community=Locust bean gum; Passage=4 -0.1 +1.0 -0.4 +0.3 -0.6
complex community Community=Locust bean gum; Passage=4 +0.1 +0.8 -1.1 +0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.2 +0.6 +0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.3 +0.3 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.4 -0.4 +0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 +0.3 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.6 -0.1 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.6 +0.1 +0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.4 +0.2 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.2 +0.6 +0.6 -0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 +0.5 +0.2 +0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.9 +0.2 -0.1 +0.2
complex community Community=guar; Passage=4 +0.2 -0.3 +0.4 +0.6 +0.2
complex community Community=Kojac gum; Passage=4 +0.2 +1.1 +0.1 +0.1 +0.3
complex community Community=arabino-guar; Passage=4 +0.2 +0.9 +0.5 +0.2 +0.1
complex community Community=guar; Passage=4 +0.1 +1.1 -0.0 +0.3 +0.6
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