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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5042 and GFF5043 are separated by 19 nucleotides
GFF5043 and GFF5044 are separated by 19 nucleotides
GFF5044 and GFF5045 are separated by 58 nucleotides
GFF5045 and GFF5046 are separated by 3 nucleotides
GFF5042 - cytochrome c subunit of flavocytochrome c sulfide dehydrogenase, at 2,055,060 to 2,055,365
GFF5042
GFF5043 - Sulfide dehydrogenase [flavocytochrome C] flavoprotein chain precursor (EC 1.8.2.-), at 2,055,385 to 2,056,665
GFF5043
GFF5044 - Alkanesulfonate utilization operon LysR-family regulator CbI, at 2,056,685 to 2,057,623
GFF5044
GFF5045 - Glutamine ABC transporter, periplasmic glutamine-binding protein (TC 3.A.1.3.2), at 2,057,682 to 2,058,584
GFF5045
GFF5046 - ABC-type amino acid transport system, permease component, at 2,058,588 to 2,059,250
GFF5046
Group
Condition
GFF5042
GFF5043
GFF5044
GFF5045
GFF5046
carbon source
Ying_Others16 rep A; time point 1
N.D.
-0.1
-0.8
-0.1
-0.1
carbon source
Ying_Others16 rep B; time point 2
N.D.
-0.1
-0.8
-0.3
+0.2
carbon source
Ying_Nucleobase14 rep A; time point 2
N.D.
-0.2
-0.8
-0.1
+0.1
carbon source
Ying_all64 rep B; time point 1
N.D.
-0.2
-0.9
+0.1
+0.1
carbon source
Ying_OrganicAcid7 rep A; time point 1
N.D.
-0.3
-0.4
+0.0
-0.1
carbon source
Ying_OrganicAcid7 rep B; time point 3
N.D.
+0.1
-0.4
+0.1
-0.5
carbon source
Ying_Nucleobase14 rep A; time point 1
N.D.
-0.6
+0.1
-0.2
+0.1
carbon source
Ying_Nucleobase14 rep B; time point 1
N.D.
-0.3
-0.1
+0.2
-0.3
carbon source
Ying_OrganicAcid7 rep B; time point 2
N.D.
-0.3
-0.3
-0.1
+0.2
carbon source
Ying_Others16 rep A; time point 2
N.D.
+0.2
-0.4
-0.1
-0.1
carbon source
Ying_sugar7 rep A; time point 1
N.D.
-0.2
-0.5
+0.1
+0.1
carbon source
Ying_all64 rep A; time point 2
N.D.
-0.4
+0.2
+0.1
-0.3
carbon source
Ying_all64 rep C; time point 3
N.D.
-0.3
+0.2
+0.3
-0.6
carbon source
Ying_sugar7 rep B; time point 2
N.D.
-0.0
-0.6
-0.0
+0.3
carbon source
Ying_all64 rep C; time point 1
N.D.
-0.1
-0.3
+0.2
-0.0
carbon source
Ying_Nucleobase14 rep C; time point 1
N.D.
-0.2
-0.0
+0.3
-0.1
carbon source
Ying_Nucleobase14 rep C; time point 2
N.D.
+0.3
-0.4
+0.1
-0.0
carbon source
Ying_sugar7 rep C; time point 1
N.D.
+0.2
-0.3
-0.3
+0.5
carbon source
Ying_Nucleobase14 rep B; time point 2
N.D.
+0.0
-0.3
+0.1
+0.2
carbon source
Ying_sugar7 rep B; time point 1
N.D.
+0.4
-0.3
+0.2
-0.2
carbon source
Ying_AminoAcid20 rep C; time point 2
N.D.
-0.3
+0.2
+0.2
+0.1
carbon source
Ying_OrganicAcid7 rep B; time point 1
N.D.
+0.2
-0.2
+0.2
-0.1
carbon source
Ying_all64 rep A; time point 1
N.D.
+0.1
-0.1
-0.1
+0.3
carbon source
Ying_Others16 rep C; time point 3
N.D.
+0.2
-0.2
+0.1
+0.1
carbon source
Ying_AminoAcid20 rep C; time point 3
N.D.
+0.1
+0.4
-0.1
-0.0
carbon source
Ying_OrganicAcid7 rep C; time point 1
N.D.
-0.1
+0.1
+0.2
+0.3
carbon source
Ying_Others16 rep B; time point 3
N.D.
+0.1
+0.5
-0.1
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 3
N.D.
-0.0
+0.6
-0.0
-0.0
carbon source
Ying_sugar7 rep C; time point 3
N.D.
+0.4
+0.2
-0.1
+0.2
carbon source
Ying_sugar7 rep A; time point 3
N.D.
+0.1
+0.6
-0.0
+0.1
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