Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF5038 and GFF5039 overlap by 4 nucleotidesGFF5039 and GFF5040 are separated by 331 nucleotidesGFF5040 and GFF5041 are separated by 78 nucleotidesGFF5041 and GFF5042 are separated by 119 nucleotides GFF5038 - Tetracycline resistance, MFS efflux pump => Tet(C), at 138,541 to 139,773 GFF5038 GFF5039 - no description, at 139,770 to 140,144 GFF5039 GFF5040 - 3-hydroxypropionate dehydrogenase DddA, flavin-containing (EC 1.1.1.59), at 140,476 to 142,107 GFF5040 GFF5041 - Malonate-semialdehyde dehydrogenase [inositol] (EC 1.2.1.18), at 142,186 to 143,697 GFF5041 GFF5042 - Transcriptional regulator, LysR family, at 143,817 to 144,749 GFF5042
Group Condition GFF5038 GFF5039 GFF5040 GFF5041 GFF5042
complex community Community=guar; Passage=4 -0.5 -1.4 -0.1 -1.7 -0.9
complex community Community=arabino-guar; Passage=4 +0.3 -1.3 -0.4 -1.6 -1.5
complex community Community=arabino-guar; Passage=4 +0.0 -1.1 -0.4 -1.5 -0.2
complex community Community=guar; Passage=4 +0.6 -0.6 +0.0 -1.6 -0.8
complex community Community=arabino-guar; Passage=4 -0.2 -0.0 +0.2 -1.7 -0.4
complex community Community=arabino-guar; Passage=4 +0.2 +0.0 +0.0 -2.2 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.0 -0.2 -1.0 +0.3 -0.7
complex community Community=Kojac gum; Passage=4 +0.3 -0.1 -0.1 -1.9 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.0 -1.1 +0.4 -0.7
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.1 -1.2 +0.3 -0.8
complex community Community=Locust bean gum; Passage=4 -0.3 +0.0 -0.0 -1.4 +0.3
complex community Community=Locust bean gum; Passage=4 -0.0 +0.8 -0.0 -1.5 -0.4
vitamin M9 with Supernatant from Cyptococcus +0.2 +0.3 -1.1 +0.1 -0.8
complex community Community=guar; Passage=4 +0.1 -0.1 +0.1 -1.5 +0.3
complex community Community=guar; Passage=4 +0.2 -0.1 +0.2 -1.6 +0.2
complex community Community=Locust bean gum; Passage=4 +0.7 -1.2 +0.0 -0.9 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.2 -0.8 +0.3 -0.1
complex community Community=Locust bean gum; Passage=4 +0.5 +0.6 +0.1 -1.4 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.2 -0.6 +0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.6 -0.4 +0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.2 -0.5 +0.3 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.7 -0.5 +0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 +0.1 -0.4 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.1 -0.6 +0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 +0.2 -0.6 +0.4 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.1 -0.5 +0.5 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.2 -0.3 +0.4 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.3 -0.4 +0.4 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.2 -0.3 +0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.2 -0.5 +0.5 +0.6
remove
GFF5038
plot		 remove
GFF5039
plot		 remove
GFF5040		 remove
GFF5041
plot		 remove
GFF5042
plot