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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF5025 and GFF5026 are separated by 168 nucleotides
GFF5026 and GFF5027 are separated by 332 nucleotides
GFF5027 and GFF5028 are separated by 30 nucleotides
GFF5028 and GFF5029 are separated by 40 nucleotides
GFF5025 - Conjugal transfer protein; TraA, at 5,016,938 to 5,017,225
GFF5025
GFF5026 - hypothetical protein, at 5,017,394 to 5,019,004
GFF5026
GFF5027 - Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11), at 5,019,337 to 5,020,332
GFF5027
GFF5028 - Shikimate 5-dehydrogenase I gamma (EC 1.1.1.25), at 5,020,363 to 5,021,166
GFF5028
GFF5029 - Transcriptional regulator, LacI family, at 5,021,207 to 5,022,214
GFF5029
Group
Condition
GFF5025
GFF5026
GFF5027
GFF5028
GFF5029
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.6
+0.2
+0.1
+0.4
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.4
+0.3
+0.2
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.8
+0.3
+0.5
+0.6
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.6
+0.3
+0.3
+0.4
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.4
+0.5
+0.4
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.3
+0.3
+0.4
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.2
+0.2
+0.5
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.3
+0.3
+0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.6
+0.2
+0.2
+0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.2
+0.4
+0.4
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.3
+0.4
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.6
+0.2
+0.4
+0.4
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.3
+0.4
+0.4
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.5
+0.5
+0.4
+0.3
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.5
+0.3
+0.4
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.7
+0.1
+0.5
+0.5
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
+0.2
+0.5
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.3
+0.7
+0.4
+0.1
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