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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF5020 and GFF5021 are separated by 13 nucleotides
GFF5021 and GFF5022 are separated by 48 nucleotides
GFF5022 and GFF5023 are separated by 375 nucleotides
GFF5023 and GFF5024 are separated by 18 nucleotides
GFF5020 - Tripartite tricarboxylate transporter TctB family, at 121,570 to 122,058
GFF5020
GFF5021 - Tripartite tricarboxylate transporter TctA family, at 122,072 to 123,583
GFF5021
GFF5022 - FIG011065: hypothetical protein, at 123,632 to 124,390
GFF5022
GFF5023 - Ammonium transporter, at 124,766 to 126,001
GFF5023
GFF5024 - hypothetical protein, at 126,020 to 126,322
GFF5024
Group
Condition
GFF5020
GFF5021
GFF5022
GFF5023
GFF5024
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.3
-0.2
-1.1
-0.4
complex community
Community=arabino-guar; Passage=4
-0.0
+0.2
+0.1
-0.6
-0.9
complex community
Community=Kojac gum; Passage=4
+0.1
+0.0
-0.2
-1.1
+0.2
complex community
Community=guar; Passage=4
+0.0
+0.2
-0.2
-0.6
-0.4
phage
phage_bap4
-0.2
-0.1
-0.1
-0.5
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.2
+0.2
-0.1
-1.1
+0.1
complex community
Community=arabino-guar; Passage=4
-0.0
+0.1
+0.4
-0.7
-0.5
complex community
Community=arabino-guar; Passage=4
+0.2
+0.0
-0.1
-0.7
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-0.0
-0.1
-0.0
-0.2
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.0
-0.1
-0.0
-0.2
-0.2
complex community
Community=Kojac gum; Passage=1
+0.0
-0.1
-0.1
-0.3
-0.1
complex community
Community=guar; Passage=4
+0.1
-0.1
-0.1
-0.7
+0.2
complex community
Community=Locust bean gum; Passage=4
+0.1
+0.3
-0.3
-0.6
+0.0
phage
phage_bap4
-0.1
-0.1
+0.1
-0.2
-0.1
phage
phage_bap4
-0.2
-0.1
-0.2
-0.2
+0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
+0.0
-0.1
+0.1
-0.2
-0.2
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-0.1
-0.2
-0.2
-0.1
+0.2
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.1
+0.1
-0.3
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.1
+0.2
-0.2
-0.2
no phage control
no phage control
-0.0
+0.2
+0.0
-0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.1
+0.1
-0.3
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.0
-0.1
+0.2
-0.3
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
+0.1
+0.1
+0.1
-0.1
-0.2
complex community
Community=guar; Passage=4
+0.0
+0.7
-0.0
-0.5
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
+0.0
-0.1
+0.1
-0.2
+0.2
complex community
Community=Locust bean gum; Passage=4
+0.0
+0.1
+0.2
-0.6
+0.4
complex community
Community=guar; Passage=4
+0.1
+0.2
+0.4
-0.4
-0.0
complex community
Community=arabino-guar; Passage=4
+0.2
+0.2
-0.0
-0.6
+0.6
phage
phage_bap4
+0.1
+0.2
-0.1
-0.0
+0.3
phage
phage_bap4
+0.1
+0.1
+0.2
+0.1
+0.1
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