Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF5011 and GFF5012 are separated by 46 nucleotidesGFF5012 and GFF5013 are separated by 26 nucleotidesGFF5013 and GFF5014 are separated by 7 nucleotidesGFF5014 and GFF5015 are separated by 74 nucleotides GFF5011 - Geranyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.5), at 112,679 to 114,631 GFF5011 GFF5012 - Citronellol dehydrogenase; Citronellal dehydrogenase, at 114,678 to 115,580 GFF5012 GFF5013 - Citronellyl-CoA dehydrogenase, at 115,607 to 116,767 GFF5013 GFF5014 - Acyl-CoA dehydrogenase, at 116,775 to 117,950 GFF5014 GFF5015 - Putative stomatin/prohibitin-family membrane protease subunit aq_911, at 118,025 to 118,783 GFF5015
Group Condition GFF5011 GFF5012 GFF5013 GFF5014 GFF5015
complex community Community=Locust bean gum; Passage=4 -0.1 -0.4 +0.1 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.2 -0.0 -0.2 -0.2
phage phage_bap4 -0.1 -0.2 -0.1 -0.0 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.0 +0.1 -0.3 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.0 +0.1 -0.3 -0.2
phage phage_bap4 -0.1 -0.2 -0.2 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.2 -0.0 -0.4 -0.1
complex community Community=Locust bean gum; Passage=4 +0.3 -0.4 -0.2 +0.0 -0.0
complex community Community=guar; Passage=4 +0.0 -0.3 -0.2 +0.2 +0.0
complex community Community=arabino-guar; Passage=4 -0.2 +0.1 +0.1 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 -0.2 -0.2 +0.0 +0.1
phage phage_bap4 +0.0 -0.1 -0.1 -0.1 +0.2
complex community Community=guar; Passage=4 -0.2 -0.2 +0.0 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 +0.1 -0.1 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 -0.1 -0.2 +0.1
complex community Community=Kojac gum; Passage=4 +0.1 -0.0 -0.3 +0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 +0.1 +0.1 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.2 -0.0 -0.1 +0.1
no phage control no phage control +0.1 -0.0 +0.0 -0.1 +0.3
no phage control no phage control +0.1 -0.1 +0.1 +0.1 +0.2
phage phage_bap4 +0.1 -0.1 +0.1 +0.0 +0.3
complex community Community=Locust bean gum; Passage=4 +0.5 +0.1 -0.3 -0.1 +0.2
complex community Community=arabino-guar; Passage=4 -0.0 -0.1 +0.2 +0.2 +0.2
phage phage_bap4 +0.1 +0.2 -0.0 -0.0 +0.2
phage phage_bap4 +0.0 -0.0 -0.0 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.2 +0.0 +0.0 +0.2
complex community Community=Kojac gum; Passage=1 +0.0 +0.1 +0.0 +0.0 +0.4
complex community Community=Locust bean gum; Passage=4 +0.1 +0.4 -0.0 -0.0 +0.3
complex community Community=guar; Passage=4 +0.3 +0.5 -0.4 +0.0 +0.8
complex community Community=arabino-guar; Passage=4 +0.1 +0.5 +0.2 +0.5 +0.7
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