Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF48 and GFF49 are separated by 119 nucleotidesGFF49 and GFF50 are separated by 102 nucleotidesGFF50 and GFF51 are separated by 98 nucleotidesGFF51 and GFF52 are separated by 620 nucleotides GFF48 - DNA double-strand break repair protein Mre11, at 52,990 to 54,117 GFF48 GFF49 - no description, at 54,237 to 54,428 GFF49 GFF50 - Murein hydrolase activator NlpD, at 54,531 to 55,268 GFF50 GFF51 - hypothetical protein, at 55,367 to 56,233 GFF51 GFF52 - Polyketide synthase modules and related proteins, at 56,854 to 64,083 GFF52
Group Condition GFF48 GFF49 GFF50 GFF51 GFF52
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 N.D. +0.1 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.4 N.D. -0.3 +0.1 +0.0
phage phage_bap4 -0.3 N.D. -0.1 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.4 N.D. +0.0 -0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 N.D. -0.0 -0.1 -0.0
complex community Community=Locust bean gum; Passage=4 -0.2 N.D. -0.3 +0.0 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 N.D. -0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 N.D. -0.0 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 N.D. -0.0 -0.1 -0.1
no phage control no phage control +0.0 N.D. -0.1 -0.2 -0.0
complex community Community=guar; Passage=4 -0.2 N.D. -0.1 +0.2 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 N.D. -0.1 +0.1 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 N.D. -0.0 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 N.D. -0.1 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.5 N.D. +0.2 -0.0 +0.1
phage phage_bap4 +0.1 N.D. -0.1 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 N.D. +0.1 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 N.D. +0.1 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 -0.2 N.D. -0.3 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.0 N.D. -0.0 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.3 N.D. -0.0 -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. +0.1 -0.1 -0.1
complex community Community=arabino-guar; Passage=4 -0.2 N.D. +0.0 +0.2 +0.0
complex community Community=guar; Passage=4 -0.0 N.D. -0.0 +0.2 +0.0
complex community Community=guar; Passage=4 +0.3 N.D. +0.0 +0.1 -0.2
phage phage_bap4 +0.1 N.D. +0.1 +0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.3 N.D. +0.1 +0.0 +0.1
phage phage_bap4 +0.3 N.D. -0.0 +0.2 +0.1
complex community Community=guar; Passage=4 +0.4 N.D. -0.1 +0.3 +0.0
complex community Community=Kojac gum; Passage=4 +0.6 N.D. -0.1 +0.1 +0.1
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