Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4989 and GFF4990 are separated by 60 nucleotidesGFF4990 and GFF4991 are separated by 91 nucleotidesGFF4991 and GFF4992 are separated by 140 nucleotidesGFF4992 and GFF4993 are separated by 6 nucleotides GFF4989 - Transcriptional regulator, LysR family, at 89,837 to 90,733 GFF4989 GFF4990 - Acyl-CoA hydrolase (EC 3.1.2.20), at 90,794 to 91,243 GFF4990 GFF4991 - Polyhydroxyalkanoate granule-associated protein PhaF, at 91,335 to 91,802 GFF4991 GFF4992 - Transcriptional regulator, AcrR family, at 91,943 to 92,668 GFF4992 GFF4993 - putative tetratricopeptide repeat family protein, at 92,675 to 93,517 GFF4993
Group Condition GFF4989 GFF4990 GFF4991 GFF4992 GFF4993
complex community Community=guar; Passage=4 +0.4 -0.1 -5.1 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.0 -2.2 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.0 -0.6 -1.5 -0.2 +0.3
complex community Community=Locust bean gum; Passage=4 -0.3 +0.3 -1.7 -0.1 +0.2
complex community Community=Kojac gum; Passage=4 -0.8 +0.0 -0.8 -0.2 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.1 -1.3 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.1 -1.1 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.5 +0.0 -0.5 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.5 -0.1 -0.5 -0.0 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.1 -0.7 -0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.5 -0.0 -0.5 -0.0 +0.0
phage phage_bap4 -0.1 -0.1 -0.6 +0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.4 -0.0 -0.6 +0.0 +0.1
phage phage_bap4 -0.3 -0.3 -0.4 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.6 -0.2 +0.1 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.2 -0.3 -0.0 +0.1
complex community Community=guar; Passage=4 -0.2 +0.2 -0.4 +0.1 -0.0
complex community Community=arabino-guar; Passage=4 +0.2 +0.8 -1.1 -0.2 -0.0
complex community Community=arabino-guar; Passage=4 -0.4 -0.2 +0.7 -0.2 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.4 +0.1 +0.2 -0.2 +0.1
no phage control no phage control +0.2 +0.3 -0.4 +0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.0 +0.5 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.9 +0.2 +0.7 -0.0 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.3 +0.7 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.1 +0.5 -0.0 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.2 +0.6 +0.0 +0.1
complex community Community=guar; Passage=4 +0.1 -0.2 +1.1 -0.0 -0.2
no phage control no phage control -0.1 +0.2 +0.7 +0.0 +0.0
complex community Community=Locust bean gum; Passage=4 -0.4 +0.7 +0.8 -0.0 +0.4
complex community Community=guar; Passage=4 -0.5 +0.5 +1.6 +0.1 +0.2
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