Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4988 and GFF4989 are separated by 120 nucleotidesGFF4989 and GFF4990 are separated by 60 nucleotidesGFF4990 and GFF4991 are separated by 91 nucleotidesGFF4991 and GFF4992 are separated by 140 nucleotides GFF4988 - Gentisate 1,2-dioxygenase (EC 1.13.11.4), at 88,655 to 89,716 GFF4988 GFF4989 - Transcriptional regulator, LysR family, at 89,837 to 90,733 GFF4989 GFF4990 - Acyl-CoA hydrolase (EC 3.1.2.20), at 90,794 to 91,243 GFF4990 GFF4991 - Polyhydroxyalkanoate granule-associated protein PhaF, at 91,335 to 91,802 GFF4991 GFF4992 - Transcriptional regulator, AcrR family, at 91,943 to 92,668 GFF4992
Group Condition GFF4988 GFF4989 GFF4990 GFF4991 GFF4992
complex community Community=guar; Passage=4 +0.1 +0.4 -0.1 -5.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.4 +0.0 -2.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.2 +0.0 -0.6 -1.5 -0.2
complex community Community=Kojac gum; Passage=4 -0.3 -0.8 +0.0 -0.8 -0.2
complex community Community=Locust bean gum; Passage=4 -0.1 -0.3 +0.3 -1.7 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.3 +0.1 -1.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 -0.4 -0.0 -0.6 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 -0.5 -0.1 -0.5 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.5 +0.0 -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.3 +0.1 -1.3 -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.3 +0.1 -0.7 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.4 -0.4 +0.0 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 -0.5 -0.0 -0.5 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 -0.6 -0.1 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.2 -0.7 +0.1 -0.1 -0.0
complex community Community=arabino-guar; Passage=4 -0.7 -0.3 +0.1 +0.2 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 -0.4 +0.2 -0.3 -0.0
complex community Community=guar; Passage=4 -0.2 -0.2 +0.2 -0.4 +0.1
complex community Community=arabino-guar; Passage=4 -0.3 -0.4 -0.2 +0.7 -0.2
complex community Community=arabino-guar; Passage=4 +0.0 +0.2 +0.8 -1.1 -0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.2 -0.2 +0.4 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 -0.3 -0.0 +0.5 -0.1
complex community Community=arabino-guar; Passage=4 -0.0 -0.9 +0.2 +0.7 -0.0
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.3 +0.1 +0.5 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.2 +0.1 -0.3 +0.7 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.2 +0.2 +0.6 +0.0
no phage control no phage control -0.3 -0.1 +0.2 +0.7 +0.0
complex community Community=guar; Passage=4 -0.3 +0.1 -0.2 +1.1 -0.0
complex community Community=Locust bean gum; Passage=4 -0.1 -0.4 +0.7 +0.8 -0.0
complex community Community=guar; Passage=4 +0.2 -0.5 +0.5 +1.6 +0.1
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