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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Hydrogenophaga sp. GW460-11-11-14-LB1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4968 and GFF4969 are separated by 326 nucleotides
GFF4969 and GFF4970 are separated by 21 nucleotides
GFF4970 and GFF4971 are separated by 138 nucleotides
GFF4971 and GFF4972 are separated by 25 nucleotides
GFF4968 - Chromate transport protein ChrA, at 1,985,027 to 1,986,370
GFF4968
GFF4969 - PAS/PAC sensor signal transduction histidine kinase, at 1,986,697 to 1,988,721
GFF4969
GFF4970 - DNA-binding response regulator, LuxR family, at 1,988,743 to 1,989,384
GFF4970
GFF4971 - hypothetical protein, at 1,989,523 to 1,989,921
GFF4971
GFF4972 - PUTATIVE TRANSMEMBRANE PROTEIN, at 1,989,947 to 1,991,059
GFF4972
Group
Condition
GFF4968
GFF4969
GFF4970
GFF4971
GFF4972
carbon source
Ying_all64 rep C; time point 3
-0.1
-0.1
-0.1
-0.5
-0.5
carbon source
Ying_sugar7 rep B; time point 3
-0.1
-0.3
-0.6
-0.0
-0.2
carbon source
Ying_all64 rep C; time point 2
-0.1
+0.1
+0.1
-0.7
-0.3
carbon source
Ying_OrganicAcid7 rep B; time point 1
-0.0
-0.2
-0.1
-0.3
-0.1
carbon source
Ying_AminoAcid20 rep B; time point 2
+0.0
+0.1
-0.2
-0.3
-0.1
carbon source
Ying_all64 rep B; time point 3
-0.0
+0.1
-0.1
-0.3
-0.1
carbon source
Ying_sugar7 rep C; time point 1
+0.0
+0.1
+0.2
-0.9
+0.1
carbon source
Ying_OrganicAcid7 rep A; time point 3
+0.1
+0.1
+0.0
-0.4
-0.3
carbon source
Ying_Nucleobase14 rep A; time point 1
+0.0
-0.2
+0.2
-0.1
-0.2
carbon source
Ying_sugar7 rep C; time point 3
+0.1
+0.0
-0.1
-0.3
-0.1
carbon source
Ying_Others16 rep C; time point 1
+0.1
+0.1
-0.1
-0.3
-0.1
carbon source
Ying_OrganicAcid7 rep C; time point 2
+0.1
-0.1
+0.1
-0.4
-0.1
carbon source
Ying_all64 rep B; time point 2
+0.0
-0.1
+0.1
-0.4
+0.0
carbon source
Ying_OrganicAcid7 rep A; time point 1
+0.2
+0.1
+0.1
-0.4
-0.2
carbon source
Ying_OrganicAcid7 rep B; time point 3
+0.0
+0.0
+0.2
-0.5
+0.0
carbon source
Ying_AminoAcid20 rep B; time point 3
-0.1
+0.3
-0.2
+0.0
-0.2
carbon source
Ying_Others16 rep C; time point 3
+0.0
-0.4
+0.1
+0.2
-0.2
carbon source
Ying_sugar7 rep B; time point 2
+0.2
+0.2
+0.2
-0.2
-0.5
carbon source
Ying_OrganicAcid7 rep C; time point 3
+0.2
-0.1
-0.2
-0.1
-0.0
carbon source
Ying_Others16 rep B; time point 2
+0.2
+0.0
+0.0
-0.2
-0.2
carbon source
Ying_AminoAcid20 rep A; time point 3
-0.1
-0.2
+0.2
+0.1
-0.1
carbon source
Ying_Nucleobase14 rep A; time point 2
+0.2
-0.1
+0.1
-0.5
+0.3
carbon source
Ying_Nucleobase14 rep B; time point 1
+0.1
-0.1
-0.0
-0.2
+0.2
carbon source
Ying_Nucleobase14 rep B; time point 2
+0.1
-0.3
+0.3
-0.2
+0.2
carbon source
Ying_all64 rep A; time point 1
+0.0
+0.1
+0.0
-0.3
+0.2
carbon source
Ying_Nucleobase14 rep C; time point 1
-0.0
-0.4
+0.2
-0.1
+0.4
carbon source
Ying_all64 rep B; time point 1
-0.0
+0.2
-0.0
-0.1
+0.2
carbon source
Ying_AminoAcid20 rep B; time point 1
+0.0
-0.1
+0.2
+0.2
-0.0
carbon source
Ying_Others16 rep A; time point 2
+0.3
+0.2
-0.0
-0.3
+0.2
carbon source
Ying_Others16 rep C; time point 2
+0.2
-0.1
+0.4
+0.0
+0.1
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