Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4958 and GFF4959 overlap by 4 nucleotidesGFF4959 and GFF4960 overlap by 4 nucleotidesGFF4960 and GFF4961 overlap by 4 nucleotidesGFF4961 and GFF4962 are separated by 7 nucleotides GFF4958 - ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 58,886 to 59,806 GFF4958 GFF4959 - ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 59,803 to 60,792 GFF4959 GFF4960 - ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate), at 60,789 to 61,544 GFF4960 GFF4961 - ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate), at 61,541 to 62,260 GFF4961 GFF4962 - Multidrug resistance transporter, Bcr/CflA family, at 62,268 to 63,476 GFF4962
Group Condition GFF4958 GFF4959 GFF4960 GFF4961 GFF4962
complex community Community=arabino-guar; Passage=4 -1.4 -0.1 N.D. -1.1 -0.2
complex community Community=Locust bean gum; Passage=4 +0.2 -1.7 N.D. -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -1.2 +0.1 N.D. +0.3 -0.4
complex community Community=arabino-guar; Passage=4 -0.4 +0.7 N.D. -1.1 -0.3
vitamin M9 with Supernatant from Cyptococcus -0.6 -0.1 N.D. -0.3 +0.2
complex community Community=guar; Passage=4 -0.0 -0.1 N.D. -0.6 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.4 N.D. -0.0 +0.2
complex community Community=arabino-guar; Passage=4 -0.9 +0.8 N.D. +0.3 -0.5
complex community Community=Locust bean gum; Passage=4 +0.8 -1.2 N.D. +0.6 -0.5
complex community Community=arabino-guar; Passage=4 -1.4 +0.5 N.D. +0.3 +0.4
no phage control no phage control +0.0 +0.2 N.D. -0.6 +0.1
complex community Community=Kojac gum; Passage=4 -1.2 +0.4 N.D. +0.4 +0.2
complex community Community=guar; Passage=4 +0.3 +0.5 N.D. -0.7 -0.3
phage phage_bap4 -0.4 +0.7 N.D. -0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 -0.5 N.D. -0.2 +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.7 N.D. +0.6 +0.2
complex community Community=Locust bean gum; Passage=4 +0.4 -1.0 N.D. -0.1 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.3 N.D. +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 +0.1 N.D. -0.2 -0.2
phage phage_bap4 -0.3 +0.6 N.D. -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.3 +0.4 N.D. +0.1 +0.2
complex community Community=guar; Passage=4 -0.3 +0.2 N.D. +0.4 +0.2
complex community Community=guar; Passage=4 +0.6 +0.6 N.D. -0.6 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.5 N.D. +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.5 N.D. +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 N.D. +0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 +0.2 N.D. +0.3 +0.3
phage phage_bap4 +0.1 +0.6 N.D. +0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.5 N.D. +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 +0.4 N.D. +0.2 +0.4
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