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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4958 and GFF4959 are separated by 170 nucleotides
GFF4959 and GFF4960 are separated by 144 nucleotides
GFF4960 and GFF4961 are separated by 93 nucleotides
GFF4961 and GFF4962 are separated by 37 nucleotides
GFF4958 - hypothetical protein, at 4,955,207 to 4,955,812
GFF4958
GFF4959 - UPF0301 protein YqgE, at 4,955,983 to 4,956,543
GFF4959
GFF4960 - Peroxiredoxin, at 4,956,688 to 4,957,170
GFF4960
GFF4961 - AMP nucleosidase (EC 3.2.2.4), at 4,957,264 to 4,958,718
GFF4961
GFF4962 - Putative diguanylate cyclase (GGDEF domain) with PAS/PAC sensor domain, at 4,958,756 to 4,959,904
GFF4962
Group
Condition
GFF4958
GFF4959
GFF4960
GFF4961
GFF4962
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.1
-1.1
-0.7
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-1.2
-0.5
-0.3
N.D.
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.5
-0.4
-0.4
N.D.
-0.8
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.7
-0.4
-0.3
N.D.
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-0.4
-0.4
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.6
-0.3
-0.4
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
-0.3
-0.6
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.2
-0.5
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
-0.5
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.5
-0.5
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.3
-0.2
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.4
-0.4
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.3
-0.3
N.D.
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
-0.3
N.D.
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.4
-0.4
-0.2
N.D.
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.3
-0.2
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.3
-0.1
N.D.
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.2
-0.3
-0.2
N.D.
-0.0
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