Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4943 and GFF4944 are separated by 49 nucleotidesGFF4944 and GFF4945 are separated by 24 nucleotidesGFF4945 and GFF4946 overlap by 4 nucleotidesGFF4946 and GFF4947 overlap by 4 nucleotides GFF4943 - Chloride channel protein, at 35,108 to 36,487 GFF4943 GFF4944 - Excinuclease ABC subunit A, at 36,537 to 39,635 GFF4944 GFF4945 - probable GntR-family transcriptional regulator, at 39,660 to 40,415 GFF4945 GFF4946 - Glycerol-3-phosphate dehydrogenase (EC 1.1.5.3), at 40,412 to 42,181 GFF4946 GFF4947 - Erythritol kinase EryA (EC 2.7.1.27), at 42,178 to 43,665 GFF4947
Group Condition GFF4943 GFF4944 GFF4945 GFF4946 GFF4947
complex community Community=Locust bean gum; Passage=4 -0.5 -0.3 -1.3 -0.1 -0.3
complex community Community=Locust bean gum; Passage=4 -0.7 -0.2 -0.8 -0.2 -0.1
complex community Community=arabino-guar; Passage=4 +0.2 -0.2 -2.0 +0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.1 -0.5 -1.2 +0.2 +0.1
complex community Community=guar; Passage=4 -0.4 -0.2 -0.3 -0.1 +0.1
complex community Community=arabino-guar; Passage=4 -0.3 -0.0 -1.2 +0.2 +0.5
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.1 -0.2 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 -0.0 -0.5 -0.0 -0.3
complex community Community=guar; Passage=4 -0.2 -0.2 -0.7 +0.0 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.0 -0.4 -0.2 -0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.3 -0.3 +0.2 -0.2
phage phage_bap4 -0.1 -0.0 -0.1 -0.0 -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 -0.0 -0.5 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 -0.5 -0.2 -0.5 +0.0 +0.7
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.1 -0.0 -0.4 +0.0 +0.1
complex community Community=Kojac gum; Passage=4 -0.2 -0.2 +0.0 +0.3 -0.3
complex community Community=guar; Passage=4 +0.2 -0.4 +0.0 +0.1 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.0 -0.4 -0.1 +0.1
complex community Community=guar; Passage=4 -0.3 -0.2 -0.5 +0.0 +0.7
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.1 -0.1 +0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.0 +0.2 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.0 +0.1 -0.3 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.2 +0.0 +0.2 -0.2 +0.1
no phage control no phage control +0.2 +0.0 +0.1 +0.0 -0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.0 +0.0 +0.4 -0.1 +0.1
phage phage_bap4 -0.1 +0.1 +0.2 +0.1 +0.1
complex community Community=Kojac gum; Passage=1 +0.0 +0.0 +0.4 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.0 +0.3 +0.3 +0.2
complex community Community=Locust bean gum; Passage=1 -0.0 +0.0 +0.4 +0.1 +0.5
complex community Community=Locust bean gum; Passage=4 +0.7 -0.2 -0.6 +0.2 +1.3
remove
GFF4943
plot		 remove
GFF4944
plot		 remove
GFF4945		 remove
GFF4946
plot		 remove
GFF4947
plot