Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4927 and GFF4928 overlap by 4 nucleotidesGFF4928 and GFF4929 overlap by 4 nucleotidesGFF4929 and GFF4930 are separated by 103 nucleotidesGFF4930 and GFF4931 overlap by 17 nucleotides GFF4927 - Citrate-proton symporter, at 18,123 to 19,418 GFF4927 GFF4928 - hypothetical protein, at 19,415 to 21,757 GFF4928 GFF4929 - Aminotransferase, class III, at 21,754 to 23,166 GFF4929 GFF4930 - Transcriptional regulator, LysR family, at 23,270 to 24,187 GFF4930 GFF4931 - peptidase, family M14, at 24,171 to 25,904 GFF4931
Group Condition GFF4927 GFF4928 GFF4929 GFF4930 GFF4931
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.1 -0.1 -0.2 -0.3 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.1 -0.0 -0.1 -0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus -0.0 +0.1 +0.0 -0.4 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 -0.0 +0.2 -0.2 -0.1
phage phage_bap4 +0.0 +0.0 +0.1 -0.5 +0.1
complex community Community=Locust bean gum; Passage=4 -0.1 -0.1 +0.1 -0.6 +0.5
vitamin M9 with Supernatant from Cyptococcus +0.1 +0.1 +0.1 -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.0 -0.0 -0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.0 +0.2 -0.3 -0.2
phage phage_bap4 +0.1 +0.1 -0.0 -0.3 -0.1
no phage control no phage control -0.0 +0.0 -0.0 -0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.0 +0.1 +0.2 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 +0.0 +0.0 -0.3 +0.1
phage phage_bap4 -0.1 +0.1 +0.0 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 +0.1 -0.7 +0.3
complex community Community=Locust bean gum; Passage=4 +0.0 +0.1 -0.0 +0.2 -0.2
complex community Community=guar; Passage=4 +0.1 +0.0 +0.1 -0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.0 +0.1 +0.2 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 -0.1 +0.2 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 -0.0 +0.1 -0.4 +0.2
complex community Community=Locust bean gum; Passage=1 -0.0 +0.1 +0.1 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 +0.0 +0.2 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 +0.1 +0.1 +0.2
complex community Community=guar; Passage=4 +0.1 -0.0 +0.3 +0.4 -0.1
complex community Community=arabino-guar; Passage=4 +0.1 +0.2 +0.3 +0.3 -0.2
complex community Community=Kojac gum; Passage=4 +0.2 +0.4 +0.3 -0.6 +0.5
complex community Community=Locust bean gum; Passage=4 -0.0 +0.1 +0.4 +0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -0.1 +0.1 -0.1 +0.6 +0.4
complex community Community=guar; Passage=4 +0.1 +0.3 -0.0 +0.0 +0.7
complex community Community=guar; Passage=4 +0.5 -0.1 +0.0 +0.4 +0.4
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