Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_25210	PS417_25215	PS417_25220	PS417_25225	PS417_25230
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.1	N.D.	-0.4	-3.0	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	N.D.	-0.3	-2.4	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.2	N.D.	-0.9	-0.9	N.D.
nitrogen source	Adenine (N)	-0.5	N.D.	-1.2	-0.4	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	N.D.	-1.3	-0.8	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	N.D.	+0.3	-2.4	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	N.D.	-0.2	-1.8	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	N.D.	+0.1	-2.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.1	N.D.	-0.0	-2.0	N.D.
seeds	Growth on radish seeds for 72 hours	+0.1	N.D.	+0.6	-2.7	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	N.D.	+0.1	-1.8	N.D.
stress	Phosphomycin 0.003 mg/ml	-0.0	N.D.	-0.7	-1.0	N.D.
agar plate interaction control	Taped volatile agar plate with no fungus	+0.0	N.D.	-0.3	-1.5	N.D.
phage	P. simiae Grant Run MOI 0.1	-0.3	N.D.	-0.2	-1.2	N.D.
soil	soil sample 6; outgrowth in LB	-0.2	N.D.	+0.2	-1.5	N.D.
phage	JP1 MOI 1	+0.1	N.D.	-0.3	-1.2	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	N.D.	+0.1	-1.4	N.D.
seeds	Growth on radish seeds for 72 hours	-0.1	N.D.	+0.4	-1.4	N.D.
carbon source	L-Valine (C)	-0.1	N.D.	+0.7	-1.5	N.D.
supernatant control	Vogels_fungal_media 0.1X	+0.3	N.D.	-1.5	+0.4	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.1	N.D.	+0.7	-1.4	N.D.
phage	P. simiae ORA MOI 1	+0.4	N.D.	+0.5	-1.1	N.D.
phage	JP1 MOI 10	+0.5	N.D.	-1.0	+0.7	N.D.
phage	JP1 MOI 1	-0.0	N.D.	-0.6	+1.1	N.D.
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days	-0.4	N.D.	+0.5	+0.8	N.D.
no phage control	Time6-nophage	-0.2	N.D.	+0.3	+1.2	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.6	N.D.	-0.0	+0.9	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.0	N.D.	+0.3	+1.4	N.D.
carbon source	L-Valine (C)	+0.5	N.D.	-0.6	+1.9	N.D.
soil	soil sample 7; outgrowth in LB	-0.1	N.D.	+0.5	+1.5	N.D.