Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4912 and GFF4913 are separated by 144 nucleotidesGFF4913 and GFF4914 are separated by 13 nucleotidesGFF4914 and GFF4915 are separated by 44 nucleotidesGFF4915 and GFF4916 are separated by 48 nucleotides GFF4912 - tRNA-specific 2-thiouridylase MnmA (EC 2.8.1.13), at 3,734 to 4,843 GFF4912 GFF4913 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 4,988 to 6,715 GFF4913 GFF4914 - Luciferase-like monooxygenase YhbW, at 6,729 to 7,727 GFF4914 GFF4915 - hypothetical protein, at 7,772 to 9,454 GFF4915 GFF4916 - FIG00959407: hypothetical protein, at 9,503 to 10,102 GFF4916
Group Condition GFF4912 GFF4913 GFF4914 GFF4915 GFF4916
complex community Community=Locust bean gum; Passage=4 N.D. -0.1 -0.3 +0.1 -1.4
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 -0.1 +0.0 -0.5
phage phage_bap4 N.D. +0.0 +0.1 -0.1 -0.6
complex community Community=guar; Passage=4 N.D. +0.0 +0.4 -0.1 -0.8
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. +0.1 -0.0 -0.1 -0.5
vitamin M9 with Supernatant from Cyptococcus N.D. +0.1 -0.2 -0.0 -0.3
complex community Community=arabino-guar; Passage=4 N.D. -0.0 -0.0 +0.2 -0.7
vitamin M9 with Supernatant from Cyptococcus N.D. +0.0 -0.0 -0.0 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.1 -0.1 -0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.0 -0.1 +0.0 -0.3
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -0.3 +0.3 -0.2
vitamin M9 with Supernatant from Cyptococcus N.D. +0.0 -0.2 -0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. -0.1 +0.1 +0.2 -0.1
complex community Community=guar; Passage=4 N.D. +0.1 -0.2 +0.2 -0.0
phage phage_bap4 N.D. +0.1 +0.1 +0.2 -0.3
complex community Community=Locust bean gum; Passage=4 N.D. -0.2 +0.1 -0.1 +0.4
complex community Community=arabino-guar; Passage=4 N.D. +0.2 -0.2 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 N.D. +0.1 +0.0 -0.1 +0.3
complex community Community=guar; Passage=4 N.D. -0.1 +0.0 -0.3 +0.7
vitamin M9 with Supernatant from Cyptococcus N.D. -0.0 -0.1 +0.0 +0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. -0.0 +0.2 +0.1 +0.1
no phage control no phage control N.D. +0.1 +0.1 -0.0 +0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.1 +0.0 +0.1 +0.3
complex community Community=Locust bean gum; Passage=1 N.D. -0.0 +0.1 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -0.2 +0.4 +0.2
complex community Community=Locust bean gum; Passage=4 N.D. -0.0 -0.1 +0.1 +0.6
complex community Community=guar; Passage=4 N.D. +0.2 -0.0 +0.3 +0.1
phage phage_bap4 N.D. -0.0 +0.1 +0.0 +0.5
phage phage_bap4 N.D. +0.0 +0.1 +0.1 +0.5
complex community Community=arabino-guar; Passage=4 N.D. +0.4 +0.0 +0.3 +0.4
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