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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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500 nt
GFF489 and GFF490 are separated by 115 nucleotides
GFF490 and GFF491 are separated by 24 nucleotides
GFF491 and GFF492 are separated by 128 nucleotides
GFF492 and GFF493 are separated by 272 nucleotides
GFF489 - ATP-dependent Clp protease proteolytic subunit ClpP (EC 3.4.21.92), at 530,201 to 530,809
GFF489
GFF490 - Cell division trigger factor (EC 5.2.1.8), at 530,925 to 532,241
GFF490
GFF491 - no description, at 532,266 to 532,382
GFF491
GFF492 - no description, at 532,511 to 533,476
GFF492
GFF493 - RND efflux system, inner membrane transporter, at 533,749 to 536,907
GFF493
Group
Condition
GFF489
GFF490
GFF491
GFF492
GFF493
complex community
Community=Kojac gum; Passage=4
-0.2
-1.6
-1.6
-0.6
+0.1
phage
phage_bap4
-2.0
-0.4
-0.7
-0.3
-0.1
phage
phage_bap4
-2.8
-0.3
-0.2
-0.1
-0.0
phage
phage_bap4
-2.0
-0.7
-0.6
-0.1
-0.1
phage
phage_bap4
-2.3
-0.6
-0.4
-0.2
+0.0
phage
phage_bap4
-2.4
-0.5
-0.3
-0.2
+0.1
phage
phage_bap4
-2.2
-0.4
-0.5
-0.1
-0.0
phage
phage_bap4
-1.6
-0.6
-0.6
-0.2
-0.2
no phage control
no phage control
-2.2
-0.4
-0.4
-0.2
+0.0
phage
phage_bap4
-1.8
-0.5
-0.4
-0.2
-0.2
vitamin
M9 with Supernatant from Cyptococcus
-2.6
-0.3
-0.2
-0.0
+0.1
no phage control
no phage control
-2.2
-0.5
-0.4
+0.2
-0.1
no phage control
no phage control
-2.3
-0.2
-0.3
-0.2
+0.0
vitamin
M9 with Supernatant from Cyptococcus
-2.3
-0.3
-0.2
-0.0
+0.1
complex community
Community=Locust bean gum; Passage=4
-0.3
-0.8
-1.8
+0.1
-0.0
no phage control
no phage control
-1.9
-0.4
-0.2
-0.1
+0.0
phage
phage_bap4
-1.7
-0.5
-0.3
+0.0
-0.0
vitamin
M9 with Supernatant from Cyptococcus
-2.2
-0.2
-0.1
-0.0
+0.0
complex community
Community=Locust bean gum; Passage=4
-0.2
-0.9
-1.3
-0.2
+0.0
phage
phage_bap4
-0.9
-0.6
-0.6
-0.1
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-1.8
-0.2
-0.3
-0.0
-0.0
complex community
Community=Locust bean gum; Passage=4
-0.1
-1.2
-1.1
+0.3
-0.1
vitamin
M9 with Supernatant from Cyptococcus
-1.7
-0.5
+0.1
-0.2
+0.1
vitamin
M9 with Supernatant from Cyptococcus
-2.0
-0.0
-0.2
-0.2
+0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-2.1
-0.2
+0.1
+0.0
+0.0
complex community
Community=arabino-guar; Passage=4
-0.4
-1.2
-1.0
+0.4
+0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-1.6
-0.2
-0.4
-0.1
+0.1
vitamin
M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL
-1.6
-0.2
-0.2
-0.1
+0.1
complex community
Community=arabino-guar; Passage=4
-0.3
-1.2
-1.2
+0.6
+0.1
complex community
Community=arabino-guar; Passage=4
-0.3
-1.4
-0.5
+0.2
+0.0
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