Fitness for 5 genes in Pseudomonas sp. DMC3

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Top 18 experiments (either direction), sorted by average fitness

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500 ntGFF4906 and GFF4907 are separated by 276 nucleotidesGFF4907 and GFF4908 are separated by 137 nucleotidesGFF4908 and GFF4909 are separated by 121 nucleotidesGFF4909 and GFF4910 are separated by 121 nucleotides GFF4906 - Methyl-accepting chemotaxis protein CtpH, at 188,294 to 189,916 GFF4906 GFF4907 - Zinc transport protein ZntB, at 190,193 to 191,215 GFF4907 GFF4908 - HTH-type transcriptional regulator PgrR, at 191,353 to 192,249 GFF4908 GFF4909 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 192,371 to 193,129 GFF4909 GFF4910 - hypothetical protein, at 193,251 to 193,688 GFF4910
Group Condition GFF4906 GFF4907 GFF4908 GFF4909 GFF4910
carbon source D-Glucose and D,L-Lactate (C) +0.1 -0.4 -0.1 -0.3 +0.0
carbon source D,L-Lactate (C) -0.0 -0.4 -0.1 -0.1 -0.0
carbon source D,L-Lactate and casaminos (C) +0.2 -0.1 -0.3 -0.2 -0.2
carbon source D,L-Lactate (C) -0.0 -0.1 +0.1 +0.0 -0.1
carbon source D,L-Lactate (C) +0.1 +0.1 +0.1 -0.3 -0.0
carbon source D,L-Lactate and casaminos (C) +0.1 +0.1 -0.0 -0.1 -0.0
carbon source D-Glucose (C) +0.2 -0.1 +0.2 -0.1 -0.1
carbon source D-Glucose and casaminos (C) -0.1 +0.2 -0.2 +0.2 +0.1
carbon source D-Glucose (C) +0.2 +0.0 +0.1 -0.1 -0.0
carbon source D,L-Lactate and casaminos (C) +0.5 -0.1 -0.2 +0.0 +0.0
carbon source D-Glucose and D,L-Lactate (C) +0.0 -0.1 +0.0 +0.4 -0.1
mixed community Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane +0.3 +0.0 -0.2 +0.2 -0.1
mixed community Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane +0.5 -0.2 +0.0 +0.0 +0.0
carbon source D-Glucose (C) +0.1 -0.1 +0.3 +0.0 +0.0
mixed community Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane +0.2 +0.1 +0.0 +0.1 -0.1
carbon source D-Glucose and casaminos (C) +0.1 +0.0 +0.2 +0.3 -0.1
carbon source D-Glucose and casaminos (C) +0.4 +0.3 -0.1 -0.3 +0.1
carbon source D-Glucose and D,L-Lactate (C) +0.0 +0.4 -0.1 +0.0 +0.1
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