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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4902 and GFF4903 overlap by 4 nucleotides
GFF4903 and GFF4904 are separated by 4 nucleotides
GFF4904 and GFF4905 are separated by 42 nucleotides
GFF4905 and GFF4906 are separated by 209 nucleotides
GFF4902 - hypothetical protein, at 4,892,986 to 4,893,885
GFF4902
GFF4903 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3), at 4,893,882 to 4,895,558
GFF4903
GFF4904 - Acryloyl-CoA reductase AcuI/YhdH (EC 1.3.1.84), at 4,895,563 to 4,896,546
GFF4904
GFF4905 - hypothetical protein, at 4,896,589 to 4,897,269
GFF4905
GFF4906 - hypothetical protein, at 4,897,479 to 4,899,908
GFF4906
Group
Condition
GFF4902
GFF4903
GFF4904
GFF4905
GFF4906
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.6
-0.3
-0.3
-0.2
-0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.4
-0.4
-0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.3
-0.4
-0.4
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.3
-0.2
-0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.3
-0.4
-0.4
-0.3
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.5
-0.4
-0.2
-0.3
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
-0.4
-0.4
-0.2
-0.4
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.6
-0.2
-0.4
-0.1
-0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
-0.3
-0.3
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.3
-0.2
-0.4
-0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-0.4
-0.2
-0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-0.3
-0.3
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.2
-0.2
-0.3
-0.1
-0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
-0.3
-0.4
-0.1
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
-0.3
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.1
-0.3
-0.0
-0.3
-0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.0
-0.2
-0.3
-0.2
-0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.4
-0.2
+0.1
-0.0
-0.1
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