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Gene
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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4891 and GFF4892 are separated by 113 nucleotides
GFF4892 and GFF4893 are separated by 545 nucleotides
GFF4893 and GFF4894 are separated by 77 nucleotides
GFF4894 and GFF4895 are separated by 142 nucleotides
GFF4891 - Transport ATP-binding protein CydD, at 7,670 to 9,436
GFF4891
GFF4892 - Thioredoxin reductase (EC 1.8.1.9), at 9,550 to 10,518
GFF4892
GFF4893 - Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system, at 11,064 to 11,558
GFF4893
GFF4894 - Cell division protein FtsK, at 11,636 to 15,670
GFF4894
GFF4895 - Outer membrane lipoprotein carrier protein LolA, at 15,813 to 16,424
GFF4895
Group
Condition
GFF4891
GFF4892
GFF4893
GFF4894
GFF4895
phage
LB_plus_SM_buffer with Br60_phage 0.000005 MOI
-6.1
-0.8
-0.1
N.D.
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.0000005 MOI
-5.4
-0.8
-0.1
N.D.
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 0.01875 MOI
-5.3
-0.5
-0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI
-5.5
-0.3
-0.0
N.D.
N.D.
phage
LB_plus_SM_buffer with Br60_phage 0.00005 MOI
-5.4
-0.2
-0.0
N.D.
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-4.8
-0.8
-0.1
N.D.
N.D.
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
-3.3
-2.0
-0.1
N.D.
N.D.
phage
LB_plus_SM_buffer with 6C2_phage 0.25 MOI
-4.2
-0.9
-0.2
N.D.
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
-4.8
+0.1
-0.1
N.D.
N.D.
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
-3.7
-0.9
-0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.000001875 MOI
-3.8
-0.7
-0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with 6D2_phage 0.75 MOI
-4.0
-0.5
-0.1
N.D.
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.0001875 MOI
-3.5
-0.6
-0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.1875 MOI
-3.4
-0.6
-0.3
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.0001875 MOI
-3.2
-0.7
-0.1
N.D.
N.D.
lb_plus_sm_buffer
LB_plus_SM_buffer
-4.5
+0.5
-0.1
N.D.
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.01875 MOI
-2.9
-0.9
-0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.01875 MOI
-3.1
-0.7
-0.0
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.001875 MOI
-3.0
-0.4
-0.4
N.D.
N.D.
phage
LB_plus_SM_buffer with phi19h1_phage 0.1875 MOI
-3.5
-0.3
+0.0
N.D.
N.D.
phage
LB_plus_SM_buffer with Ffm_phage 0.001875 MOI
-3.0
-0.5
-0.1
N.D.
N.D.
phage
LB_plus_SM_buffer with 6H2_phage 0.5 MOI
-4.0
+0.4
-0.0
N.D.
N.D.
micoeukaryotes
Dictyostellum sp.mixed culture-2
-2.4
-0.8
-0.3
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-2.5
-0.8
-0.2
N.D.
N.D.
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
-3.0
-0.6
+0.1
N.D.
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.0875 MOI
-2.8
+0.8
+0.0
N.D.
N.D.
phage
LB_plus_SM_buffer with EIP16_phage 0.875 MOI
-2.4
+1.5
+0.4
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
-1.8
+3.5
+0.6
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+0.3
+2.4
+0.9
N.D.
N.D.
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
-0.3
+5.4
+0.8
N.D.
N.D.
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