Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_24945	PS417_24950	PS417_24955	PS417_24960	PS417_24965
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.3	-0.1	-0.5	+0.1	N.D.
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.3	+0.1	-0.5	+0.2	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.1	+0.2	-0.7	+0.1	N.D.
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	-0.3	+0.2	-0.2	-0.0	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.1	-0.5	-0.1	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5	-0.1	+0.1	+0.2	N.D.
root	root sample 6; outgrowth in LB	-0.5	+0.0	+0.1	+0.2	N.D.
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.4	+0.3	+0.1	-0.1	N.D.
rhizosphere	rhizosphere sample 8; outgrowth in LB	-0.2	+0.2	+0.2	-0.2	N.D.
stress	R2A with Polymyxin B sulfate 0.002 mg/ml	-0.4	+0.1	+0.2	+0.1	N.D.
stress	Gentamicin 0.008 mg/ml	-0.3	-0.0	+0.6	-0.1	N.D.
phage	P. simiae Grant Run MOI 0.1	-0.2	+0.2	+0.6	-0.1	N.D.
supernatant control	Vogels_fungal_media 0.2X; growth supplemented with 0.4X LB	-0.2	+0.2	+0.4	-0.0	N.D.
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.2	+0.3	+0.3	+0.1	N.D.
phage	Wcs_0.1	+0.4	-0.0	+0.2	+0.1	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.1	+0.1	+0.5	+0.2	N.D.
motility	outer cut, LB soft agar motility assay	+0.2	+0.3	+0.2	+0.1	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant	+0.2	+0.1	+0.1	+0.4	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.3	+0.1	+0.2	+0.2	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	+0.1	+0.3	-0.1	N.D.
motility	inner cut, LB soft agar motility assay	+0.2	+0.3	+0.1	+0.3	N.D.
motility	outer cut, LB soft agar motility assay	+0.2	+0.2	+0.2	+0.3	N.D.
agar plate interaction control	Taped volatile agar plate with no fungus	+0.6	+0.1	-0.1	+0.3	N.D.
stress	6-methoxy-2(3H)-benzoxazolone 1.2 mM	+0.4	+0.1	+0.1	+0.3	N.D.
stress	methylglyoxal 0.032 vol%	+0.4	+0.3	+0.2	+0.1	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.4	+0.0	+0.7	+0.0	N.D.
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.3	+0.2	+0.5	+0.1	N.D.
stress	LB_noSalt with Chloride 1100 mM	+0.4	+0.4	+0.2	+0.2	N.D.
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.9	+0.1	+0.4	+0.1	N.D.
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	+0.3	+0.2	+0.7	+0.4	N.D.