Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4872 and GFF4873 overlap by 4 nucleotidesGFF4873 and GFF4874 are separated by 50 nucleotidesGFF4874 and GFF4875 are separated by 26 nucleotidesGFF4875 and GFF4876 are separated by 83 nucleotides GFF4872 - ParA-like protein, at 243,337 to 243,975 GFF4872 GFF4873 - no description, at 243,972 to 244,178 GFF4873 GFF4874 - Plasmid replication initiator protein, at 244,229 to 245,077 GFF4874 GFF4875 - hypothetical protein, at 245,104 to 245,385 GFF4875 GFF4876 - FIG00973848: hypothetical protein, at 245,469 to 246,218 GFF4876
Group Condition GFF4872 GFF4873 GFF4874 GFF4875 GFF4876
no phage control no phage control -0.5 +0.1 -0.2 -0.0 -0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.3 -0.1 -0.2 -0.2
complex community Community=guar; Passage=4 -0.7 -0.1 +0.3 -0.2 -0.0
phage phage_bap4 -0.5 +0.3 -0.0 -0.0 +0.0
phage phage_bap4 -0.4 +0.2 +0.0 -0.1 +0.1
no phage control no phage control -0.5 +0.2 -0.0 +0.1 +0.0
phage phage_bap4 -0.3 +0.3 -0.0 -0.1 +0.0
complex community Community=guar; Passage=4 -0.4 -0.0 +0.7 -0.4 +0.0
complex community Community=arabino-guar; Passage=4 -0.5 +0.2 +0.2 +0.1 -0.0
complex community Community=Locust bean gum; Passage=4 +0.0 -0.3 +0.1 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 -0.0 +0.2 -0.3 -0.1 +0.3
vitamin M9 with Supernatant from Cyptococcus +0.2 -0.1 -0.2 +0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.1 -0.2 -0.0 +0.1
complex community Community=guar; Passage=4 +0.2 +0.1 +0.1 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 +0.1 -0.1 +0.0 -0.1
complex community Community=Locust bean gum; Passage=4 +0.1 -0.5 +0.7 -0.2 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.3 +0.2 +0.1 -0.2 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.2 -0.1 +0.1 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 +0.2 +0.2 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.0 +0.2 +0.0 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.4 -0.1 +0.2 -0.1 +0.1
complex community Community=guar; Passage=4 +0.6 +0.1 +0.1 -0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL +0.4 -0.1 +0.1 +0.3 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.3 +0.1 +0.2 +0.1 -0.0
complex community Community=Kojac gum; Passage=4 +0.2 +0.0 +0.2 +0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.3 +0.2 +0.2 +0.2 -0.0
complex community Community=Locust bean gum; Passage=4 +0.7 +0.1 +0.6 -0.5 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 +0.0 +0.1 +0.2 +0.2
complex community Community=arabino-guar; Passage=4 +1.1 -0.1 +0.3 -0.1 -0.0
complex community Community=arabino-guar; Passage=4 +0.6 +0.4 +0.4 +0.0 -0.0
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