Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4867 and GFF4868 are separated by 47 nucleotidesGFF4868 and GFF4869 are separated by 436 nucleotidesGFF4869 and GFF4870 overlap by 4 nucleotidesGFF4870 and GFF4871 overlap by 4 nucleotides GFF4867 - Enoyl-CoA hydratase (EC 4.2.1.17), at 239,194 to 239,496 GFF4867 GFF4868 - Type IV secretory pathway, VirD2 components (relaxase), at 239,544 to 241,526 GFF4868 GFF4869 - Type IV secretory pathway, protease TraF, at 241,963 to 242,550 GFF4869 GFF4870 - Glycosidases, at 242,547 to 243,080 GFF4870 GFF4871 - FIG00457034: hypothetical protein, at 243,077 to 243,340 GFF4871
Group Condition GFF4867 GFF4868 GFF4869 GFF4870 GFF4871
complex community Community=guar; Passage=4 -0.1 -0.2 +0.5 -0.0 -3.1
complex community Community=Locust bean gum; Passage=4 -0.3 -0.5 -0.0 -0.0 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL -0.7 +0.0 +0.3 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.0 +0.2 +0.0 -0.6
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 -0.1 +0.0 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.0 +0.2 +0.2 -0.5
complex community Community=guar; Passage=4 -0.5 +0.0 -0.4 +0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.0 +0.3 -0.0 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 +0.4 -0.2 -0.4
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.0 -0.0 +0.5 -0.2 -0.5
vitamin M9 with Supernatant from Cyptococcus -0.8 +0.0 +0.3 +0.0 +0.2
complex community Community=arabino-guar; Passage=4 -0.1 +0.1 +0.3 +0.1 -0.7
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 +0.0 +0.4 -0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 -0.0 +0.4 -0.0 -0.6
phage phage_bap4 +0.4 +0.1 -0.1 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.7 +0.0 +0.3 +0.1 +0.1
complex community Community=guar; Passage=4 +0.3 +0.1 +0.0 +0.5 -0.8
complex community Community=Locust bean gum; Passage=1 +0.4 -0.0 -0.0 +0.1 -0.4
phage phage_bap4 +0.3 +0.1 +0.1 +0.2 -0.3
complex community Community=guar; Passage=4 +0.6 +0.1 -0.0 +0.0 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.3 +0.0 +0.2 -0.1 +0.5
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.4 -0.0 +0.4 +0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.1 +0.4 +0.0 +0.4
complex community Community=Locust bean gum; Passage=4 -0.5 +0.2 +0.4 +0.1 +0.4
complex community Community=Locust bean gum; Passage=4 +0.4 -0.0 -0.4 -0.1 +0.8
complex community Community=Locust bean gum; Passage=4 +0.5 +0.2 +0.6 +0.1 -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.4 +0.1 +0.2 +0.3 +0.1
complex community Community=arabino-guar; Passage=4 +0.0 +0.0 -0.1 +0.4 +0.7
complex community Community=arabino-guar; Passage=4 +0.5 +0.1 -0.1 +0.3 +0.8
complex community Community=Kojac gum; Passage=4 +1.1 +0.1 +0.6 -0.5 +0.7
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