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Cofit
Protein
Homologs
Fitness for 5 genes in
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4866 and GFF4867 are separated by 192 nucleotides
GFF4867 and GFF4868 overlap by 1 nucleotides
GFF4868 and GFF4869 are separated by 272 nucleotides
GFF4869 and GFF4870 are separated by 51 nucleotides
GFF4866 - probable lipoprotein, at 165,501 to 165,728
GFF4866
GFF4867 - Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA, at 165,921 to 167,126
GFF4867
GFF4868 - Cysteine desulfurase CsdA-CsdE, sulfur acceptor protein CsdE, at 167,126 to 167,569
GFF4868
GFF4869 - FIG00761799: membrane protein, at 167,842 to 168,756
GFF4869
GFF4870 - CsdL (EC-YgdL) protein of the HesA/MoeB/ThiF family, part of the CsdA-E-L sulfur transfer pathway, at 168,808 to 169,614
GFF4870
Group
Condition
GFF4866
GFF4867
GFF4868
GFF4869
GFF4870
phage
LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI
-1.3
-0.6
N.D.
+0.2
-0.0
phage
6F2_phage 15 MOI
-1.7
+0.1
N.D.
+0.2
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage 0.5 MOI
+0.1
-0.7
N.D.
-0.6
+0.1
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+0.6
-0.4
N.D.
-0.7
-0.2
phage
phi19h1_phage 15 MOI
+0.5
-0.4
N.D.
-0.5
-0.2
phage
6F2_phage 15 MOI
-0.7
-0.1
N.D.
+0.4
+0.1
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.8
-0.2
N.D.
-1.1
+0.1
phage
LB_plus_SM_buffer with EIP30_phage 0.0000875 MOI
-0.8
+0.0
N.D.
+0.5
+0.0
phage
phi19h1_phage 15 MOI
+0.5
+0.2
N.D.
-0.3
-0.3
phage
LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI
+0.6
+0.1
N.D.
-0.5
-0.0
phage
6H2_phage 10 MOI; agar plate assay
+0.9
+0.0
N.D.
-0.6
-0.1
phage
LB_plus_SM_buffer with 6F2_phage 0.1875 MOI
-0.3
+0.8
N.D.
-0.2
-0.1
phage
LB_plus_SM_buffer with FelixO1_phage 0.05 MOI
+1.1
-0.3
N.D.
-0.1
-0.3
phage
LB_plus_SM_buffer with S16_phage 15 MOI
+1.4
-0.5
N.D.
-0.1
-0.3
phage
Ffm_phage 10 MOI; agar plate assay
+1.0
+0.2
N.D.
-0.8
-0.0
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+0.8
+0.2
N.D.
-0.6
+0.1
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+1.0
-0.1
N.D.
-0.3
-0.1
phage
LB_plus_SM_buffer with 6F2_phage 1.875 MOI
+0.1
+0.9
N.D.
+0.0
-0.3
phage
LB_plus_SM_buffer with P22_phage 15 MOI
+1.1
-0.0
N.D.
-0.1
-0.4
phage
LB_plus_SM_buffer with 8C2_phage 15 MOI
+1.1
-0.1
N.D.
-0.1
-0.2
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+0.7
+0.5
N.D.
-0.1
+0.0
phage
LB_plus_SM_buffer with ES18h1_phage 0.75 MOI
+0.3
+0.2
N.D.
+0.5
+0.2
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+0.9
+0.2
N.D.
+0.0
+0.1
phage
LB_plus_SM_buffer with 6D2_phage 15 MOI
+1.2
+0.1
N.D.
-0.2
+0.2
phage
LB_plus_SM_buffer with 6C2_phage 15 MOI
+1.1
+0.4
N.D.
-0.2
+0.2
micoeukaryotes
Acanthamoeba sp., muxed culture-1
+1.3
+0.4
N.D.
-0.3
+0.3
phage
LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI
+0.8
+0.5
N.D.
+0.2
+0.2
phage
LB_plus_SM_buffer with 6F2_phage 15 MOI
+1.6
+0.3
N.D.
-0.0
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI
+1.3
+0.6
N.D.
+0.2
+0.0
phage
LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI
+1.6
+0.8
N.D.
+0.0
-0.1
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