Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4864 and GFF4865 are separated by 11 nucleotidesGFF4865 and GFF4866 are separated by 34 nucleotidesGFF4866 and GFF4867 are separated by 526 nucleotidesGFF4867 and GFF4868 are separated by 47 nucleotides GFF4864 - 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9), at 235,872 to 237,053 GFF4864 GFF4865 - Enoyl-CoA hydratase (EC 4.2.1.17), at 237,065 to 237,850 GFF4865 GFF4866 - Oxidoreductase, short-chain dehydrogenase/reductase family, at 237,885 to 238,667 GFF4866 GFF4867 - Enoyl-CoA hydratase (EC 4.2.1.17), at 239,194 to 239,496 GFF4867 GFF4868 - Type IV secretory pathway, VirD2 components (relaxase), at 239,544 to 241,526 GFF4868
Group Condition GFF4864 GFF4865 GFF4866 GFF4867 GFF4868
complex community Community=Locust bean gum; Passage=4 -0.2 -0.1 +0.1 -0.3 -0.5
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.1 +0.2 -0.8 +0.0
complex community Community=guar; Passage=4 -0.2 -0.3 +0.3 -0.5 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.4 +0.1 +0.2 -0.4 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.2 +0.3 +0.2 -0.5 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -0.1 +0.1 +0.1 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 +0.1 +0.2 -0.7 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.3 -0.0 -0.5 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.2 +0.3 -0.7 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.2 +0.2 -0.0 -0.0
complex community Community=Locust bean gum; Passage=4 -0.3 +0.2 +0.5 -0.5 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.3 +0.3 +0.1 -0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 +0.3 +0.1 -0.4 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 +0.1 +0.2 -0.3 +0.0
complex community Community=Locust bean gum; Passage=4 -0.3 -0.0 -0.2 +0.5 +0.2
complex community Community=arabino-guar; Passage=4 +0.3 +0.3 -0.3 -0.1 +0.2
complex community Community=guar; Passage=4 +0.5 +0.2 -0.0 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.1 +0.0 +0.1 +0.4 +0.1
complex community Community=guar; Passage=4 +0.3 -0.0 -0.1 +0.3 +0.1
phage phage_bap4 +0.2 -0.1 -0.1 +0.4 +0.1
complex community Community=guar; Passage=4 -0.1 +0.0 +0.1 +0.6 +0.1
complex community Community=Locust bean gum; Passage=1 +0.2 +0.3 -0.2 +0.4 -0.0
phage phage_bap4 +0.4 -0.0 -0.0 +0.3 +0.1
phage phage_bap4 +0.1 +0.1 +0.1 +0.5 +0.0
no phage control no phage control +0.2 +0.2 +0.1 +0.3 -0.0
phage phage_bap4 +0.2 +0.2 +0.2 +0.3 -0.1
complex community Community=arabino-guar; Passage=4 +0.6 +0.2 +0.1 -0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.5 -0.0 +0.2 +0.4 -0.0
complex community Community=arabino-guar; Passage=4 +0.7 +0.2 -0.4 +0.5 +0.1
complex community Community=Kojac gum; Passage=4 -0.8 +0.2 +0.5 +1.1 +0.1
remove
GFF4864
plot		 remove
GFF4865
plot		 remove
GFF4866		 remove
GFF4867
plot		 remove
GFF4868
plot