Fitness for 5 genes in Hydrogenophaga sp. GW460-11-11-14-LB1

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500 ntGFF4861 and GFF4862 are separated by 91 nucleotidesGFF4862 and GFF4863 are separated by 49 nucleotidesGFF4863 and GFF4864 overlap by 4 nucleotidesGFF4864 and GFF4865 are separated by 25 nucleotides GFF4861 - Mlr7403 protein, at 1,867,891 to 1,868,556 GFF4861 GFF4862 - Histidyl-tRNA synthetase (EC 6.1.1.21), at 1,868,648 to 1,869,952 GFF4862 GFF4863 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1), at 1,870,002 to 1,871,288 GFF4863 GFF4864 - FIG021952: putative membrane protein, at 1,871,285 to 1,872,163 GFF4864 GFF4865 - Type IV pilus biogenesis protein PilF, at 1,872,189 to 1,873,055 GFF4865
Group Condition GFF4861 GFF4862 GFF4863 GFF4864 GFF4865
carbon source Ying_AminoAcid20 rep B; time point 3 -2.6 N.D. N.D. +0.1 -0.1
carbon source Ying_AminoAcid20 rep A; time point 3 -2.8 N.D. N.D. +0.5 -0.1
carbon source Ying_all64 rep B; time point 3 -2.4 N.D. N.D. +0.1 -0.0
carbon source Ying_all64 rep C; time point 2 -1.6 N.D. N.D. -0.6 +0.0
carbon source Ying_all64 rep A; time point 1 -0.9 N.D. N.D. -1.3 +0.1
carbon source Ying_all64 rep B; time point 1 -1.4 N.D. N.D. -0.7 +0.2
carbon source Ying_all64 rep C; time point 3 -1.6 N.D. N.D. +0.6 -0.8
carbon source Ying_Nucleobase14 rep C; time point 1 -1.9 N.D. N.D. -0.3 +0.3
carbon source Ying_AminoAcid20 rep C; time point 3 -2.4 N.D. N.D. +0.5 +0.2
carbon source Ying_OrganicAcid7 rep C; time point 3 -1.3 N.D. N.D. -0.1 -0.3
carbon source Ying_all64 rep A; time point 3 -1.6 N.D. N.D. -0.1 +0.1
carbon source Ying_Nucleobase14 rep B; time point 2 -1.7 N.D. N.D. -0.2 +0.4
carbon source Ying_AminoAcid20 rep B; time point 1 -1.7 N.D. N.D. +0.2 +0.1
carbon source Ying_sugar7 rep C; time point 1 -1.4 N.D. N.D. -0.4 +0.3
carbon source Ying_OrganicAcid7 rep A; time point 3 -1.1 N.D. N.D. +0.3 -0.6
carbon source Ying_AminoAcid20 rep B; time point 2 -1.9 N.D. N.D. +0.2 +0.3
carbon source Ying_AminoAcid20 rep C; time point 2 -1.7 N.D. N.D. -0.1 +0.3
carbon source Ying_sugar7 rep B; time point 1 -1.5 N.D. N.D. -0.1 +0.2
carbon source Ying_sugar7 rep C; time point 3 -1.5 N.D. N.D. +0.2 +0.2
carbon source Ying_Others16 rep A; time point 3 -2.0 N.D. N.D. +0.7 +0.1
carbon source Ying_Others16 rep B; time point 3 -2.0 N.D. N.D. +0.5 +0.5
carbon source Ying_all64 rep A; time point 2 -1.4 N.D. N.D. +0.3 +0.2
carbon source Ying_sugar7 rep A; time point 3 -1.3 N.D. N.D. +0.3 +0.3
carbon source Ying_sugar7 rep A; time point 2 -1.3 N.D. N.D. +0.1 +0.6
carbon source Ying_sugar7 rep C; time point 2 -1.0 N.D. N.D. -0.3 +0.7
carbon source Ying_sugar7 rep A; time point 1 -0.7 N.D. N.D. -0.4 +0.6
carbon source Ying_Nucleobase14 rep C; time point 2 -1.5 N.D. N.D. +0.4 +0.5
carbon source Ying_Nucleobase14 rep A; time point 1 -1.3 N.D. N.D. +0.4 +0.4
carbon source Ying_Others16 rep B; time point 1 -0.9 N.D. N.D. +0.4 +0.6
carbon source Ying_Nucleobase14 rep A; time point 2 -1.0 N.D. N.D. +1.0 +0.6
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