Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4858 and GFF4859 are separated by 188 nucleotidesGFF4859 and GFF4860 are separated by 347 nucleotidesGFF4860 and GFF4861 are separated by 194 nucleotidesGFF4861 and GFF4862 are separated by 2 nucleotides GFF4858 - Transposase, at 228,871 to 229,149 GFF4858 GFF4859 - MBL-fold metallo-hydrolase superfamily, at 229,338 to 230,387 GFF4859 GFF4860 - Transcriptional regulator, AraC family, at 230,735 to 231,763 GFF4860 GFF4861 - Butyryl-CoA dehydrogenase (EC 1.3.8.1), at 231,958 to 233,103 GFF4861 GFF4862 - Alpha-methylacyl-CoA racemase (EC 5.1.99.4), at 233,106 to 234,155 GFF4862
Group Condition GFF4858 GFF4859 GFF4860 GFF4861 GFF4862
complex community Community=arabino-guar; Passage=4 -0.9 -0.0 +0.1 +0.1 -0.2
complex community Community=arabino-guar; Passage=4 -0.5 -0.1 +0.0 -0.2 +0.0
complex community Community=arabino-guar; Passage=4 -0.5 +0.1 -0.1 -0.2 +0.2
phage phage_bap4 -0.2 -0.0 -0.1 -0.0 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.3 -0.2 -0.0 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.3 -0.0 -0.2 +0.0 +0.0
no phage control no phage control -0.1 -0.0 -0.2 -0.1 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 -0.0 -0.2 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.3 +0.0 -0.1 -0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -0.4 -0.0 -0.0 +0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL -0.2 +0.1 -0.2 -0.1 +0.0
complex community Community=guar; Passage=4 -0.3 -0.1 -0.1 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.2 -0.0 -0.2 +0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus -0.1 -0.1 -0.1 +0.0 -0.0
phage phage_bap4 +0.1 -0.1 -0.1 -0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.7 +0.1 +0.3 -0.0 +0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 -0.0 -0.1 +0.0 +0.1
complex community Community=arabino-guar; Passage=4 +0.1 +0.1 -0.1 -0.2 -0.2
complex community Community=Locust bean gum; Passage=4 +0.2 -0.0 -0.1 +0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -0.2 +0.2 -0.1 -0.1 +0.1
vitamin M9 with Supernatant from Cyptococcus -0.6 +0.0 +0.3 +0.2 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 +0.1 -0.0 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 +0.2 +0.1 +0.1 -0.1 -0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.0 -0.1 +0.0 +0.2
complex community Community=guar; Passage=4 -0.1 -0.1 +0.0 +0.2 +0.1
phage phage_bap4 +0.2 -0.0 -0.2 +0.0 +0.1
complex community Community=guar; Passage=4 +0.1 +0.1 +0.2 +0.2 -0.4
complex community Community=guar; Passage=4 +0.4 +0.1 +0.2 -0.0 +0.1
complex community Community=Locust bean gum; Passage=4 +1.0 +0.1 -0.2 -0.1 +0.1
complex community Community=Kojac gum; Passage=4 +0.5 +0.3 +0.1 +0.1 +0.2
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