Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_24800	PS417_24805	PS417_24810	PS417_24815	PS417_24820
solid stress	Fraxetin 3 mM; solid stress	-8.6	+0.0	-0.1	+0.1	+0.0
solid stress	Fraxetin 3 mM; solid stress	-7.1	-0.1	-0.4	+0.1	+0.1
carbon source	octanoate (C)	-0.0	-2.9	-3.0	+0.2	+0.1
carbon source	octanoate (C)	+0.1	-2.6	-2.6	-0.1	-0.1
solid stress	Fraxetin 3 mM; solid stress	-4.6	-0.2	-0.3	+0.2	-0.1
soil	soil sample 3; outgrowth in LB	-4.7	-0.4	-0.3	-0.1	+0.5
solid stress	Fraxetin 3 mM; solid stress	-3.6	-0.1	-0.1	-0.2	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-3.3	-0.4	-0.0	-0.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-3.5	+0.1	-0.3	+0.1	-0.2
stress	R2A with Fusaric 120 ug/mL	-3.7	+0.2	-0.0	-0.0	+0.0
stress	R2A with Fusaric 120 ug/mL	-3.5	-0.1	+0.0	+0.1	-0.0
stress	R2A with Fusaric 120 ug/mL	-3.5	+0.2	+0.1	-0.1	-0.0
stress	R2A with Fusaric 120 ug/mL	-3.2	+0.0	-0.1	+0.1	-0.1
root	root sample 6; outgrowth in LB	-3.4	-0.3	+0.1	-0.4	+0.8
carbon source	Xylitol (C)	-1.4	-0.7	-1.0	+0.0	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.8	-0.3	+0.0	+0.0	+0.2
soil	soil sample 4; outgrowth in LB	-3.4	+0.1	-0.3	+0.2	+0.6
soil	soil sample 5; outgrowth in LB	-3.1	+0.1	-0.5	+0.1	+0.5
soil	soil sample 6; outgrowth in LB	-2.2	-0.4	-0.1	-0.1	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.2	-0.2	-0.1	+0.1	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-2.9	+0.2	+0.0	+0.0	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.4	-0.3	-0.0	+0.1	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.1	-0.5	+0.1	+0.2	+0.2
rhizosphere	rhizosphere sample 8; outgrowth in LB	-2.0	-0.6	-0.2	-0.1	+0.8
stress	R2A with Fusaric 120 ug/mL	-2.6	+0.2	+0.3	+0.1	+0.1
seeds	Growth on radish seeds for 72 hours	-2.3	-0.1	+0.3	+0.1	+0.3
soil	soil sample 7; outgrowth in LB	-2.1	+0.0	-0.0	+0.3	+0.3
rhizosphere	rhizosphere sample 2; outgrowth in LB	-1.4	-0.0	-0.4	-0.1	+0.9
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+2.8	-0.1	-0.1	+0.0	-0.1
supernatant	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.2X	+3.0	-0.1	+0.0	+0.1	-0.0