Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF4844 and GFF4845 are separated by 149 nucleotidesGFF4845 and GFF4846 are separated by 18 nucleotidesGFF4846 and GFF4847 overlap by 1 nucleotidesGFF4847 and GFF4848 are separated by 611 nucleotides GFF4844 - FIG01046344: hypothetical protein, at 144,644 to 144,892 GFF4844 GFF4845 - Hypothetical flavoprotein YqcA (clustered with tRNA pseudouridine synthase C), at 145,042 to 145,491 GFF4845 GFF4846 - tRNA pseudouridine synthase C (EC 4.2.1.70), at 145,510 to 146,292 GFF4846 GFF4847 - Hypothetical protein YqcC (clustered with tRNA pseudouridine synthase C), at 146,292 to 146,621 GFF4847 GFF4848 - Syd protein, at 147,233 to 147,778 GFF4848
Group Condition GFF4844 GFF4845 GFF4846 GFF4847 GFF4848
phage LB_plus_SM_buffer with P22_phage 15 MOI -0.7 +0.2 -1.0 -0.6 -0.6
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.8 -0.1 -0.2 -0.3 -0.6
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI -0.6 -0.4 -0.6 +0.1 -0.2
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.5 -0.2 -0.1 -0.4 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI -0.7 +0.0 -0.3 -0.5 +0.3
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI -0.3 -0.2 -0.4 -0.5 +0.1
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.6 +0.1 -0.2 -0.6 +0.0
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI +0.0 -0.4 -0.2 -0.5 +0.1
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.4 -0.1 -0.3 -0.4 +0.2
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.2 -0.1 -0.4 +0.1 -0.4
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI +0.2 -0.3 -0.2 -0.3 -0.2
phage LB_plus_SM_buffer with Br60_phage 0.0000005 MOI -0.3 +0.3 -0.5 -0.1 -0.1
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.5 +0.2 -0.4 -0.1 +0.1
phage LB_plus_SM_buffer with EIP16_phage 8.75 MOI +0.2 -0.6 -0.1 -0.4 +0.4
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI -0.0 -0.2 -0.1 -1.6 +1.4
phage Ffm_phage 10 MOI; agar plate assay -0.7 -0.1 +0.3 +0.5 -0.4
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI +0.3 -0.1 -0.4 -0.1 -0.0
phage LB_plus_SM_buffer with EIP16_phage 0.875 MOI +0.4 -0.4 -0.2 -0.4 +0.2
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.5 +0.4 -0.3 -0.1 +0.2
phage LB_plus_SM_buffer with FelixO1_phage 0.05 MOI +0.0 -0.1 -0.2 -0.5 +0.7
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.075 MOI +0.2 +0.4 -0.2 -1.0 +0.6
phage LB_plus_SM_buffer with FelixO1_phage (wt new) 0.75 MOI +0.4 +0.4 -0.3 -1.0 +0.7
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI +0.2 +0.2 -0.0 -0.3 +0.2
phage phi19h1_phage 15 MOI +0.7 -0.2 +0.3 -0.3 -0.0
micoeukaryotes Acanthamoeba sp., muxed culture-1 +0.5 +0.2 -0.2 +0.2 -0.1
phage Br60_phage 15 MOI +0.5 -0.3 +0.4 +0.0 +0.1
phage Br60_phage 15 MOI +0.7 +0.1 +0.2 -0.0 -0.0
phage phi19h1_phage 15 MOI +0.2 +0.2 +0.4 +0.1 +0.1
phage 6H2_phage 10 MOI; agar plate assay +0.6 +0.1 +0.2 +0.1 +0.1
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI -0.1 -0.2 +5.6 -0.4 -0.0
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