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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4831 and GFF4832 are separated by 394 nucleotides
GFF4832 and GFF4833 are separated by 2 nucleotides
GFF4833 and GFF4834 are separated by 76 nucleotides
GFF4834 and GFF4835 are separated by 138 nucleotides
GFF4831 - Transposase, at 4,816,377 to 4,816,751
GFF4831
GFF4832 - hypothetical protein, at 4,817,146 to 4,817,277
GFF4832
GFF4833 - Oxidoreductase, aldo/keto reductase family, at 4,817,280 to 4,818,110
GFF4833
GFF4834 - Transcriptional regulator, AcrR family, at 4,818,187 to 4,818,765
GFF4834
GFF4835 - Quinone oxidoreductase (EC 1.6.5.5), at 4,818,904 to 4,819,893
GFF4835
Group
Condition
GFF4831
GFF4832
GFF4833
GFF4834
GFF4835
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.0
+0.2
-0.0
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
-0.3
+0.3
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
-0.3
+0.4
+0.4
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.3
+0.2
+0.1
+0.1
+0.3
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.4
+0.2
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.2
+0.3
+0.5
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.1
+0.2
+0.4
+0.4
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.1
+0.3
+0.6
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.3
+0.6
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.4
+0.4
+0.3
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.5
+0.2
+0.2
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.3
+0.5
+0.3
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.4
+0.4
+0.3
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
+0.1
+0.6
+0.1
+0.6
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.2
+0.4
+0.3
+0.5
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.2
+0.5
+0.1
+0.5
+0.5
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
+0.5
+0.3
+0.3
+0.6
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
+0.4
+0.5
+0.3
+0.4
+0.5
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