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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4826 and GFF4827 are separated by 113 nucleotides
GFF4827 and GFF4828 are separated by 144 nucleotides
GFF4828 and GFF4829 overlap by 8 nucleotides
GFF4829 and GFF4830 are separated by 80 nucleotides
GFF4826 - HipB protein @ Antitoxin HigA, at 4,812,121 to 4,812,354
GFF4826
GFF4827 - hypothetical protein, at 4,812,468 to 4,813,082
GFF4827
GFF4828 - IncQ plasmid conjugative transfer DNA nicking endonuclease TraR (pTi VirD2 homolog), at 4,813,227 to 4,814,333
GFF4828
GFF4829 - hypothetical protein, at 4,814,326 to 4,814,862
GFF4829
GFF4830 - Mobile element protein, at 4,814,943 to 4,816,169
GFF4830
Group
Condition
GFF4826
GFF4827
GFF4828
GFF4829
GFF4830
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.2
+0.1
+0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.0
+0.2
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.2
+0.2
+0.3
+0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.1
+0.1
+0.4
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.2
+0.2
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.3
-0.1
+0.6
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.4
+0.2
+0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.3
+0.3
+0.2
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.0
+0.3
+0.5
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.1
+0.3
+0.5
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.1
+0.2
+0.6
+0.4
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.3
+0.3
+0.3
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
+0.3
+0.3
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.3
+0.3
+0.2
+0.4
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.4
+0.2
+0.4
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
+0.3
+0.6
+0.2
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.3
+0.2
+0.6
+0.3
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
+0.3
+0.6
+0.3
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