Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_24675	PS417_24680	PS417_24685	PS417_24690	PS417_24695
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-5.5	+0.3	N.D.	N.D.	N.D.
solid stress	Fraxetin 3 mM; solid stress	-1.4	-1.0	N.D.	N.D.	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.4	+0.3	N.D.	N.D.	N.D.
solid stress	Fraxetin 2 mM; solid stress	-1.2	-0.7	N.D.	N.D.	N.D.
solid stress	Fraxetin 3 mM; solid stress	-0.8	-1.1	N.D.	N.D.	N.D.
phage	JP1 MOI 10	-1.9	+0.1	N.D.	N.D.	N.D.
phage	P. simiae OR Antrim MOI 1	-1.7	-0.0	N.D.	N.D.	N.D.
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	-1.6	-0.1	N.D.	N.D.	N.D.
solid stress	Fraxetin 3 mM; solid stress	-0.5	-1.2	N.D.	N.D.	N.D.
liquid stress	80% Methanol 0.5 mM; liquid stress	-1.6	-0.1	N.D.	N.D.	N.D.
stress	L-Lysine 60 mM	+0.1	-1.5	N.D.	N.D.	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-1.4	+0.2	N.D.	N.D.	N.D.
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.9	+1.0	N.D.	N.D.	N.D.
stress	Polymyxin B sulfate 0.006 mg/ml	+1.1	-0.7	N.D.	N.D.	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.8	+1.6	N.D.	N.D.	N.D.
carbon source	L-Valine (C)	+1.4	-0.4	N.D.	N.D.	N.D.
stress	methylglyoxal 0.032 vol%	+1.5	-0.1	N.D.	N.D.	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.0	+0.6	N.D.	N.D.	N.D.
phage	P. simiae Grant Run MOI 10	+1.8	-0.2	N.D.	N.D.	N.D.
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	+1.3	N.D.	N.D.	N.D.
carbon source	2'-Deoxyinosine 5 mM (C)	+1.6	+0.1	N.D.	N.D.	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.5	+0.2	N.D.	N.D.	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.5	+1.3	N.D.	N.D.	N.D.
phage	P. simiae OR1 MOI 0.1	+1.5	+0.3	N.D.	N.D.	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.4	+0.4	N.D.	N.D.	N.D.
soil	soil sample 4; outgrowth in LB	+1.4	+0.4	N.D.	N.D.	N.D.
in planta	Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.8	+1.1	N.D.	N.D.	N.D.
soil	soil sample 8; outgrowth in LB	+1.5	+0.5	N.D.	N.D.	N.D.
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.0	+2.1	N.D.	N.D.	N.D.
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.4	+1.4	N.D.	N.D.	N.D.