Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4823 and GFF4824 are separated by 121 nucleotidesGFF4824 and GFF4825 are separated by 88 nucleotidesGFF4825 and GFF4826 are separated by 154 nucleotidesGFF4826 and GFF4827 are separated by 71 nucleotides GFF4823 - hypothetical protein, at 195,278 to 195,577 GFF4823 GFF4824 - Transcriptional regulator, AraC family, at 195,699 to 196,424 GFF4824 GFF4825 - SWIB/MDM2 domain-containing proteins, at 196,513 to 196,968 GFF4825 GFF4826 - Permease of the drug/metabolite transporter (DMT) superfamily, at 197,123 to 198,013 GFF4826 GFF4827 - FIG00348957: hypothetical protein, at 198,085 to 198,501 GFF4827
Group Condition GFF4823 GFF4824 GFF4825 GFF4826 GFF4827
complex community Community=Kojac gum; Passage=4 N.D. -1.0 -4.0 -1.3 -0.8
complex community Community=Locust bean gum; Passage=4 N.D. -1.0 -3.8 -0.5 -0.9
complex community Community=Locust bean gum; Passage=4 N.D. -0.3 -3.3 -1.1 -0.7
complex community Community=arabino-guar; Passage=4 N.D. -0.5 -3.6 -0.6 +0.3
complex community Community=arabino-guar; Passage=4 N.D. -1.1 -1.7 -0.7 +0.2
complex community Community=guar; Passage=4 N.D. -1.6 -1.6 -0.4 +0.3
complex community Community=arabino-guar; Passage=4 N.D. +0.3 -3.2 +0.2 -0.3
complex community Community=arabino-guar; Passage=4 N.D. -0.1 -2.0 -1.1 +0.3
complex community Community=guar; Passage=4 N.D. -0.5 -2.0 -0.0 +0.1
complex community Community=guar; Passage=4 N.D. +0.1 -2.0 -0.2 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. -0.4 -1.6 -0.0 +0.1
complex community Community=guar; Passage=4 N.D. +0.2 -1.7 -0.2 -0.0
phage phage_bap4 N.D. -0.5 -0.7 -0.5 +0.1
complex community Community=Locust bean gum; Passage=4 N.D. +0.1 -1.4 +0.5 -0.7
no phage control no phage control N.D. -0.3 -0.6 -0.3 +0.1
no phage control no phage control N.D. -0.2 -0.4 -0.5 -0.1
phage phage_bap4 N.D. -0.3 -0.9 +0.0 +0.1
no phage control no phage control N.D. -0.3 -0.3 -0.4 -0.0
phage phage_bap4 N.D. -0.3 -0.4 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus N.D. -0.2 -0.6 -0.0 -0.2
complex community Community=Kojac gum; Passage=1 N.D. -0.5 -0.3 -0.3 +0.0
phage phage_bap4 N.D. -0.1 -0.9 +0.1 -0.0
phage phage_bap4 N.D. -0.2 -0.5 -0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.1 -0.3 -0.5 +0.2
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL N.D. -0.4 -0.5 -0.1 +0.4
vitamin M9 with Supernatant from Cyptococcus N.D. +0.0 -0.4 -0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. +0.5 -1.1 -0.2 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL N.D. -0.5 -0.0 +0.3 -0.2
phage phage_bap4 N.D. -0.6 -0.2 +0.5 -0.1
phage phage_bap4 N.D. +0.5 +0.2 +0.6 -0.1
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