Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4820 and GFF4821 are separated by 158 nucleotidesGFF4821 and GFF4822 are separated by 94 nucleotidesGFF4822 and GFF4823 overlap by 41 nucleotidesGFF4823 and GFF4824 are separated by 121 nucleotides GFF4820 - BUG/TctC family periplasmic protein, at 191,668 to 192,660 GFF4820 GFF4821 - Transcriptional regulator, AcrR family, at 192,819 to 193,493 GFF4821 GFF4822 - Thiamine pyrophosphate-requiring enzymes, at 193,588 to 195,318 GFF4822 GFF4823 - hypothetical protein, at 195,278 to 195,577 GFF4823 GFF4824 - Transcriptional regulator, AraC family, at 195,699 to 196,424 GFF4824
Group Condition GFF4820 GFF4821 GFF4822 GFF4823 GFF4824
complex community Community=arabino-guar; Passage=4 +0.1 -1.7 -0.3 N.D. -0.5
complex community Community=guar; Passage=4 -0.4 -0.9 -0.6 N.D. -0.5
complex community Community=guar; Passage=4 -0.1 -0.6 +0.1 N.D. -1.6
complex community Community=arabino-guar; Passage=4 +0.3 -1.1 +0.2 N.D. -1.1
complex community Community=Locust bean gum; Passage=4 +0.3 -0.3 -0.6 N.D. -1.0
complex community Community=arabino-guar; Passage=4 +0.2 -1.5 -0.1 N.D. -0.1
complex community Community=Locust bean gum; Passage=4 -1.1 -0.9 +0.3 N.D. +0.1
complex community Community=Locust bean gum; Passage=4 -0.8 -0.3 +0.2 N.D. -0.4
complex community Community=Locust bean gum; Passage=4 -0.0 -0.5 -0.4 N.D. -0.3
complex community Community=arabino-guar; Passage=4 -0.1 -1.2 -0.2 N.D. +0.3
complex community Community=Kojac gum; Passage=4 +0.1 -0.8 +0.6 N.D. -1.0
complex community Community=guar; Passage=4 -0.5 -0.6 +0.0 N.D. +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.2 -0.4 -0.2 N.D. -0.4
phage phage_bap4 +0.2 -0.1 -0.1 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.1 -0.1 N.D. -0.6
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 -0.2 -0.1 N.D. -0.5
phage phage_bap4 +0.2 -0.1 -0.1 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL +0.0 -0.3 +0.2 N.D. -0.3
complex community Community=Kojac gum; Passage=1 +0.0 -0.1 +0.1 N.D. -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.3 -0.1 -0.2 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.3 -0.0 N.D. -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.3 -0.0 -0.1 N.D. -0.4
complex community Community=Locust bean gum; Passage=1 -0.2 -0.3 +0.0 N.D. +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.4 -0.3 -0.3 N.D. -0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.4 -0.2 -0.0 N.D. -0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.3 -0.4 +0.1 N.D. +0.0
complex community Community=guar; Passage=4 +0.6 -0.9 +0.3 N.D. +0.1
phage phage_bap4 +0.0 -0.4 -0.1 N.D. +0.5
phage phage_bap4 +0.4 +0.0 +0.1 N.D. -0.3
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.1 -0.0 -0.3 N.D. +0.5
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