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Cofit
Protein
Homologs
Fitness for 5 genes in
Variovorax sp. SCN45
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
GFF4807 and GFF4808 are separated by 32 nucleotides
GFF4808 and GFF4809 are separated by 30 nucleotides
GFF4809 and GFF4810 are separated by 137 nucleotides
GFF4810 and GFF4811 are separated by 263 nucleotides
GFF4807 - Uncharacterized GST-like protein yncG, at 176,817 to 177,503
GFF4807
GFF4808 - 6,7-dimethyl-8-ribityllumazine synthase paralog, at 177,536 to 178,048
GFF4808
GFF4809 - no description, at 178,079 to 178,276
GFF4809
GFF4810 - Ferrichrome-iron receptor, at 178,414 to 180,603
GFF4810
GFF4811 - FIG074102: hypothetical protein, at 180,867 to 181,958
GFF4811
Group
Condition
GFF4807
GFF4808
GFF4809
GFF4810
GFF4811
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.7
N.D.
-0.0
-0.0
vitamin
M9 with Supernatant from Cyptococcus
-0.3
-0.6
N.D.
+0.1
+0.1
phage
phage_bap4
-0.2
-0.4
N.D.
-0.0
+0.0
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.4
-0.1
N.D.
+0.0
-0.1
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
-0.3
N.D.
+0.1
-0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
-0.3
+0.1
N.D.
+0.0
-0.2
complex community
Community=Locust bean gum; Passage=1
-0.5
-0.0
N.D.
-0.0
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.2
+0.2
N.D.
+0.0
-0.2
complex community
Community=arabino-guar; Passage=4
-0.2
-0.3
N.D.
+0.1
+0.1
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL
-0.2
-0.3
N.D.
+0.1
+0.2
vitamin
M9 with calcium pantothenate 10 mg/mL
-0.2
+0.2
N.D.
+0.1
-0.1
phage
phage_bap4
-0.4
+0.3
N.D.
-0.0
-0.0
complex community
Community=guar; Passage=4
+0.4
-0.0
N.D.
+0.2
-0.5
complex community
Community=arabino-guar; Passage=4
+0.2
-0.1
N.D.
+0.2
-0.3
phage
phage_bap4
+0.1
-0.4
N.D.
+0.1
+0.3
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL
+0.1
-0.3
N.D.
+0.1
+0.3
complex community
Community=Kojac gum; Passage=4
+0.4
+0.0
N.D.
+0.3
-0.5
complex community
Community=guar; Passage=4
+0.8
-0.3
N.D.
+0.1
-0.4
phage
phage_bap4
-0.1
+0.5
N.D.
-0.0
-0.1
complex community
Community=guar; Passage=4
+0.4
+0.5
N.D.
+0.0
-0.5
vitamin
M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL
-0.1
+0.3
N.D.
+0.0
+0.3
vitamin
M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL
-0.1
+0.4
N.D.
+0.1
+0.2
complex community
Community=Locust bean gum; Passage=4
+0.2
+0.2
N.D.
+0.2
+0.0
complex community
Community=Locust bean gum; Passage=4
+0.6
+0.2
N.D.
+0.1
-0.2
complex community
Community=arabino-guar; Passage=4
+0.2
+0.1
N.D.
-0.2
+0.4
complex community
Community=guar; Passage=4
+0.2
-0.2
N.D.
+0.3
+0.4
phage
phage_bap4
+0.0
+0.4
N.D.
+0.1
+0.1
complex community
Community=arabino-guar; Passage=4
+0.4
+0.1
N.D.
+0.2
+0.1
complex community
Community=Locust bean gum; Passage=4
+0.4
+0.4
N.D.
+0.1
-0.1
complex community
Community=Locust bean gum; Passage=4
+0.3
+0.3
N.D.
+0.3
+0.8
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