Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PS417_24575	PS417_24580	PS417_24585	PS417_24590	PS417_24595
nitrogen source	Inosine (N)	-0.3	-0.3	-4.7	+0.1	+0.4
solid stress	Fraxetin 3 mM; solid stress	+0.1	+0.1	-3.1	-0.5	-0.1
solid stress	Fraxetin 3 mM; solid stress	-0.6	-0.4	-2.3	+0.1	-0.2
phage	Wcs_1	-1.3	-0.7	-0.2	-0.0	-1.1
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-1.6	-0.8	-0.7	-0.3	+0.3
carbon source	Carbon source L-Citrulline 5 mM	-0.5	-0.2	-1.9	-0.4	-0.2
seeds	Growth on radish seeds for 72 hours	-1.1	-0.7	-0.4	-0.8	+0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.7	-1.3	-0.8	-0.1	-0.1
stress	1-ethyl-3-methylimidazolium acetate 35 mM	-0.3	+0.3	-3.1	-0.0	+0.1
motility_chemotaxis	Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.1	-0.5	-2.7	+0.0	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-2.3	+0.4	-1.0	+0.1	+0.1
motility_chemotaxis	Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.8	-0.4	-3.5	+0.3	+0.1
in planta	Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-2.2	-0.2	-0.2	-0.1	+0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.3	+0.1	-2.4	+0.1	+0.1
soil	soil sample 3; outgrowth in LB	-1.0	-1.1	+0.1	-0.6	+0.4
solid stress	Fraxetin 3 mM; solid stress	+0.3	+0.3	-2.1	-0.3	-0.2
solid stress	Fraxetin 3 mM; solid stress	+0.2	+0.3	-2.6	+0.2	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.4	+0.1	-2.7	-0.0	+0.1
soil	soil sample 7; outgrowth in LB	-0.9	-1.6	+0.3	-0.2	+0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.0	-0.6	-2.3	-0.1	+0.1
carbon source	Trisodium citrate (C)	-0.5	+0.4	-1.6	+0.1	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Cysteine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.8	-0.2	-2.1	+0.3	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.7	+0.3	-2.0	-0.1	+0.1
nitrogen source	Adenosine (N)	+0.6	-0.5	-1.5	+0.3	+0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Aspartic Acid; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.1	-0.2	-2.1	+0.3	+0.2
root	root sample 6; outgrowth in LB	+0.1	-1.0	+0.5	-0.5	+0.9
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+1.3	+0.5	-1.0	-0.2	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-1.0	-0.1	-0.2	+1.7	+0.7
stress	R2A with Polymyxin B sulfate 0.003 mg/ml	+1.6	+0.6	+0.3	+0.2	-0.2
carbon source	L-Valine (C)	+1.6	+0.7	-0.2	+0.4	+0.1