Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4801 and GFF4802 are separated by 82 nucleotidesGFF4802 and GFF4803 are separated by 153 nucleotidesGFF4803 and GFF4804 overlap by 4 nucleotidesGFF4804 and GFF4805 are separated by 45 nucleotides GFF4801 - DedA protein, at 172,147 to 172,815 GFF4801 GFF4802 - Osmotically-inducible lipoprotein OsmB, at 172,898 to 173,185 GFF4802 GFF4803 - N-acetylmuramoyl-L-alanine amidase (EC 3.5.1.28), at 173,339 to 174,829 GFF4803 GFF4804 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 174,826 to 175,383 GFF4804 GFF4805 - Epoxyqueuosine reductase (EC 1.17.99.6) QueG, at 175,429 to 176,391 GFF4805
Group Condition GFF4801 GFF4802 GFF4803 GFF4804 GFF4805
complex community Community=Kojac gum; Passage=4 +0.3 +0.2 -2.8 -1.1 +0.3
complex community Community=guar; Passage=4 +0.2 +0.2 -2.9 +0.0 +0.0
complex community Community=guar; Passage=4 +0.1 +0.3 -2.8 +0.1 +0.0
complex community Community=guar; Passage=4 +0.0 -0.1 -1.6 -0.3 -0.1
complex community Community=arabino-guar; Passage=4 +0.4 -0.3 -2.0 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -0.5 +0.3 -1.9 +0.3 +0.1
complex community Community=Locust bean gum; Passage=4 +0.7 +0.0 -2.3 -0.2 +0.1
complex community Community=arabino-guar; Passage=4 +0.8 +0.4 -0.5 -2.1 -0.1
complex community Community=arabino-guar; Passage=4 +0.3 +0.1 -1.3 -0.2 -0.3
phage phage_bap4 -0.6 -0.0 -0.3 -0.5 +0.1
phage phage_bap4 -0.5 +0.1 -0.1 -0.5 +0.0
phage phage_bap4 -0.6 -0.2 +0.1 -0.0 -0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.3 -0.0 +0.2 -0.3 -0.1
phage phage_bap4 -0.7 -0.1 +0.0 +0.4 +0.1
phage phage_bap4 -0.5 +0.1 +0.1 -0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.1 +0.1 +0.2 -0.4 +0.1
phage phage_bap4 +0.1 +0.2 +0.1 -0.6 +0.2
vitamin M9 with Supernatant from Cyptococcus -0.1 +0.2 +0.3 -0.2 -0.0
complex community Community=guar; Passage=4 +0.8 -0.2 -2.7 +2.3 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL -0.1 +0.3 +0.1 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 +0.1 +0.1 +0.6 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 +0.2 +0.1 +0.5 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL -0.0 +0.1 +0.0 +0.6 -0.0
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 -0.0 +0.0 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 +0.1 +0.3 +0.5 -0.1
complex community Community=Locust bean gum; Passage=4 +0.8 +0.0 -1.8 +1.8 +0.2
complex community Community=arabino-guar; Passage=4 +0.7 +0.2 -1.1 +1.0 +0.2
complex community Community=Locust bean gum; Passage=4 +0.7 +0.2 -1.4 +1.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.2 +0.1 +0.2 +0.4 +0.0
complex community Community=Locust bean gum; Passage=1 +0.1 +0.3 +0.3 +0.5 -0.0
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