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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF478 and GFF479 overlap by 1 nucleotides
GFF479 and GFF480 are separated by 172 nucleotides
GFF480 and GFF481 are separated by 39 nucleotides
GFF481 and GFF482 are separated by 32 nucleotides
GFF478 - Succinate dehydrogenase hydrophobic membrane anchor protein, at 479,601 to 479,990
GFF478
GFF479 - Succinate dehydrogenase cytochrome b-556 subunit, at 479,990 to 480,385
GFF479
GFF480 - Methyl-accepting chemotaxis sensor/transducer protein, at 480,558 to 481,889
GFF480
GFF481 - Ribosomal protein L11 methyltransferase, at 481,929 to 482,927
GFF481
GFF482 - Dienelactone hydrolase family protein, at 482,960 to 483,679
GFF482
Group
Condition
GFF478
GFF479
GFF480
GFF481
GFF482
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
-0.5
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
-0.2
-0.2
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
-0.2
-0.3
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
-0.2
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
-0.2
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
-0.2
-0.1
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
-0.2
-0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
-0.3
-0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
-0.2
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
-0.2
+0.0
-0.0
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
-0.1
-0.2
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
-0.2
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
-0.2
-0.1
+0.0
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
-0.1
+0.0
-0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
N.D.
-0.1
-0.1
+0.1
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
N.D.
-0.2
-0.0
+0.1
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
-0.1
-0.1
+0.2
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
N.D.
-0.2
+0.0
+0.1
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