Fitness for 5 genes in Variovorax sp. SCN45

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 61 experiments or choose conditions or try the comparative fitness browser

500 ntGFF4790 and GFF4791 are separated by 5 nucleotidesGFF4791 and GFF4792 overlap by 4 nucleotidesGFF4792 and GFF4793 are separated by 168 nucleotidesGFF4793 and GFF4794 are separated by 4 nucleotides GFF4790 - Nudix-related transcriptional regulator NrtR, at 160,668 to 161,393 GFF4790 GFF4791 - RNA polymerase ECF-type sigma factor, at 161,399 to 162,634 GFF4791 GFF4792 - PhnB protein, at 162,631 to 162,993 GFF4792 GFF4793 - Homoserine dehydrogenase (EC 1.1.1.3), at 163,162 to 164,523 GFF4793 GFF4794 - Ectoine hydroxylase (EC 1.17.-.-), at 164,528 to 165,403 GFF4794
Group Condition GFF4790 GFF4791 GFF4792 GFF4793 GFF4794
complex community Community=guar; Passage=4 -1.1 -0.2 -3.6 +0.1 +0.2
complex community Community=arabino-guar; Passage=4 -0.8 -0.0 -1.6 -0.0 -0.3
complex community Community=arabino-guar; Passage=4 -0.8 -0.1 -2.2 +0.1 +0.1
phage phage_bap4 -3.1 -0.0 +0.6 -0.2 +0.1
phage phage_bap4 -2.7 -0.0 +0.5 -0.1 -0.1
complex community Community=guar; Passage=4 -1.3 -0.7 -0.6 -0.1 +0.3
phage phage_bap4 -2.5 -0.1 +0.0 +0.1 +0.0
phage phage_bap4 -2.4 -0.1 +0.0 -0.0 +0.2
complex community Community=guar; Passage=4 -1.4 -0.0 -1.0 +0.2 -0.1
complex community Community=guar; Passage=4 -1.6 +0.2 -0.9 -0.0 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.4 +0.2 -0.8 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL -0.9 +0.1 -0.8 +0.1 -0.1
complex community Community=Locust bean gum; Passage=4 -1.4 +0.2 -0.3 -0.0 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -1.0 +0.1 -0.7 +0.1 +0.1
complex community Community=Kojac gum; Passage=4 -1.9 -0.3 +0.5 -0.1 +0.5
complex community Community=arabino-guar; Passage=4 -1.2 +0.6 -0.3 +0.2 -0.5
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL -1.3 +0.3 -0.3 +0.1 +0.0
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL -0.5 +0.4 -0.8 -0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.2 +0.0 -0.1 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -1.3 +0.1 -0.1 +0.1 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL -1.0 +0.2 -0.3 +0.2 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL -1.0 +0.2 -0.1 -0.1 +0.2
complex community Community=Locust bean gum; Passage=4 -1.7 -0.1 +1.3 -0.2 +0.0
complex community Community=Locust bean gum; Passage=4 -1.5 +0.2 +0.2 +0.4 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -1.4 +0.3 +0.1 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.1 +0.2 -1.1 +0.1 +0.1
complex community Community=Locust bean gum; Passage=4 -1.5 +0.5 +0.3 +0.0 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL -0.8 +0.5 +0.1 +0.1 +0.1
no phage control no phage control -0.8 -0.0 +0.8 +0.1 -0.0
no phage control no phage control -0.5 +0.3 +0.7 +0.2 +0.2
remove
GFF4790
plot
remove
GFF4791
plot
remove
GFF4792
remove
GFF4793
plot
remove
GFF4794
plot