Fitness for 5 genes in Pseudomonas simiae WCS417

Top 30 experiments (either direction), sorted by average fitness

Or view all 554 experiments or choose conditions or try the comparative fitness browser

Group	Condition	PS417_24355	PS417_24360	PS417_24365	PS417_24370	PS417_24375
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-1.7	-0.1	-0.2	-4.0	-0.5
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.0	-0.4	+0.1	-4.7	-0.2
phage	P. simiae OR1 MOI 0.1	-0.7	+0.4	+0.1	-4.3	-0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.2	+0.2	-0.1	-2.9	+0.0
stress	Paraquat dichloride 0.008 mg/ml	+0.3	+0.1	-0.4	-2.9	-0.0
soil	soil sample 4; outgrowth in LB	+0.1	-0.3	-0.0	-2.5	-0.2
solid stress	Fraxetin 1 mM; solid stress	-0.2	+0.1	-0.1	-2.6	-0.1
r2a control with 0.2x vogels	R2A control with 0.2X Vogels	-0.3	-0.2	-0.3	-1.4	-0.6
supernatant	Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, non-filtered; 1X	-0.3	-0.2	+0.3	-2.2	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-0.9	-0.0	+0.2	-1.4	-0.3
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	-1.5	+0.1	+0.1	-0.9	-0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.2	+0.0	-2.5	-0.3
in planta	Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.6	-0.4	+0.2	-1.5	+0.0
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.9	+0.2	+0.6	-1.7	-0.3
soil	soil sample 8; outgrowth in LB	+0.4	+0.4	-0.3	-2.6	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Glutamic; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	-0.5	+0.4	+0.3	-1.6	-0.3
carbon source	L-Valine (C)	-0.3	+1.2	+0.1	-2.5	-0.3
motility_chemotaxis	Method=Plug_approach; Chemical=None; Chemical_conc=0mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.5	+0.3	+0.3	-2.9	+0.1
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+0.2	+0.3	+0.3	-2.1	-0.4
carbon source	L-Valine (C)	-0.3	+0.4	+0.3	-2.0	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50	+0.8	+0.2	-0.0	-2.3	-0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.3	+0.6	+0.0	-2.8	-0.2
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=Glycine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.0	+0.3	-0.6	-1.6	+0.0
motility_chemotaxis	Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Threonine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50	+1.2	+0.0	-0.1	-1.2	-0.3
supernatant control	Vogels_fungal_media 0.5X; growth supplemented with 0.4X LB	+1.1	+0.1	-0.1	-1.5	+0.0
carbon source	2'-Deoxyinosine 5 mM (C)	-1.6	+0.3	-0.3	+0.7	+0.6
supernatant	Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X	+0.8	+0.2	+0.3	-1.8	+0.3
seeds	Growth on radish seeds for 72 hours	+1.4	-0.3	-1.0	-0.1	+0.2
supernatant control	Vogels_fungal_media 0.1X	-0.9	-0.2	-0.1	+2.1	-0.2
in planta	Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days	-0.6	-0.1	+0.5	+1.9	+0.2