Fitness for 5 genes in Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

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500 ntGFF4758 and GFF4759 overlap by 1 nucleotidesGFF4759 and GFF4760 overlap by 23 nucleotidesGFF4760 and GFF4761 overlap by 4 nucleotidesGFF4761 and GFF4762 are separated by 23 nucleotides GFF4758 - Type III secretion host injection and negative regulator protein (YopD), at 65,029 to 66,039 GFF4758 GFF4759 - Surface presentation of antigens protein SpaM, at 66,039 to 66,482 GFF4759 GFF4760 - Type III secretion cytoplasmic ATP synthase (EC 3.6.3.14, YscN,SpaL,MxiB,HrcN,EscN), at 66,460 to 67,755 GFF4760 GFF4761 - Type III secretion system protein BsaR, at 67,752 to 68,159 GFF4761 GFF4762 - Type III secretion inner membrane channel protein (LcrD,HrcV,EscV,SsaV), at 68,183 to 70,240 GFF4762
Group Condition GFF4758 GFF4759 GFF4760 GFF4761 GFF4762
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.5 -1.2 -0.4 -1.0 -0.3
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI -0.3 -0.5 -0.5 -0.6 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (old) 15 MOI -0.2 -0.6 -0.5 -0.4 -0.0
phage LB_plus_SM_buffer with FelixO1_phage (wt_new) 2 MOI -0.3 -0.5 -0.4 -0.2 -0.3
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.2 -0.4 -0.2 -0.7 -0.2
micoeukaryotes C.elegans, mixed culture-1 -0.3 -0.5 -0.2 -0.3 -0.2
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.5 -0.5 -0.2 -0.2 +0.2
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.2 -0.4 -0.2 -0.3 -0.1
phage LB_plus_SM_buffer with 6D2_phage 15 MOI +0.0 -0.8 -0.5 +0.0 +0.1
phage LB_plus_SM_buffer with Ffm_phage 18.75 MOI -0.3 -0.7 -0.0 -0.2 +0.1
phage LB_plus_SM_buffer with 8C2_phage 15 MOI -0.3 -0.5 +0.3 -0.4 +0.0
phage LB_plus_SM_buffer with 6F2_phage 15 MOI -0.0 -0.7 -0.1 -0.1 +0.2
phage LB_plus_SM_buffer with S16_phage 15 MOI -0.4 -0.3 +0.1 -0.2 +0.1
phage LB_plus_SM_buffer with Ffm_phage 0.001875 MOI -0.3 -0.2 +0.2 -0.4 +0.1
phage LB_plus_SM_buffer with 6F2_phage 0.1875 MOI -0.2 -0.4 -0.0 -0.2 +0.3
phage LB_plus_SM_buffer with P22_phage 15 MOI -0.1 -0.8 +0.2 +0.2 -0.0
phage LB_plus_SM_buffer with EIP16_phage 0.0875 MOI -0.2 -0.1 +0.3 -0.4 +0.0
phage LB_plus_SM_buffer with FelixO1_phage (LP_new) 15 MOI -0.0 -0.9 -0.1 +0.3 +0.3
phage LB_plus_SM_buffer with ES18h1_phage 0.00075 MOI -0.0 -1.1 +0.5 +0.1 +0.1
phage 6F2_phage 15 MOI +0.1 -0.5 +0.1 -0.2 +0.4
phage LB_plus_SM_buffer with Br60_phage 0.0005 MOI -0.4 -0.3 -0.2 -0.1 +0.8
phage LB_plus_SM_buffer with FelixO1_phage 0.5 MOI +0.5 -0.7 -0.3 +0.3 +0.2
phage LB_plus_SM_buffer with 6F2_phage 1.875 MOI +0.1 -0.4 -0.3 +0.6 +0.2
phage LB_plus_SM_buffer with ES18h1_phage 0.75 MOI +0.6 -0.3 -0.0 -0.4 +0.2
nophagecontrol No phage control +0.1 +0.3 -0.3 +0.3 -0.2
phage 6H2_phage 10 MOI; agar plate assay +0.1 -0.4 +0.1 +0.5 +0.0
phage LB_plus_SM_buffer with Br60_phage 0.000005 MOI -0.1 +0.5 -0.1 +0.3 -0.2
lb_plus_sm_buffer LB_plus_SM_buffer -0.2 +0.2 +0.3 +0.3 -0.1
phage phi19h1_phage 15 MOI +0.4 +0.4 -0.1 +0.2 -0.1
phage LB_plus_SM_buffer with phi19h1_phage 0.001875 MOI +0.2 +0.4 -0.0 +0.5 -0.0
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