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Protein
Homologs
Fitness for 5 genes in
Pseudomonas sp. DMC3
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF4753 and GFF4754 are separated by 3 nucleotides
GFF4754 and GFF4755 overlap by 1 nucleotides
GFF4755 and GFF4756 are separated by 108 nucleotides
GFF4756 and GFF4757 are separated by 196 nucleotides
GFF4753 - Endolytic murein transglycosylase, at 12,991 to 14,172
GFF4753
GFF4754 - Aminodeoxychorismate lyase, at 14,176 to 14,991
GFF4754
GFF4755 - 3-oxoacyl-[acyl-carrier-protein] synthase 2, at 14,991 to 16,235
GFF4755
GFF4756 - Acyl carrier protein, at 16,344 to 16,580
GFF4756
GFF4757 - 3-oxoacyl-[acyl-carrier-protein] reductase FabG, at 16,777 to 17,520
GFF4757
Group
Condition
GFF4753
GFF4754
GFF4755
GFF4756
GFF4757
carbon source
D-Glucose and D,L-Lactate (C)
+0.1
-0.4
-0.9
N.D.
N.D.
carbon source
D,L-Lactate and casaminos (C)
+0.2
-0.2
-1.0
N.D.
N.D.
carbon source
D-Glucose and casaminos (C)
+0.0
-0.1
-0.8
N.D.
N.D.
carbon source
D-Glucose and D,L-Lactate (C)
+0.0
-0.2
-0.6
N.D.
N.D.
mixed community
Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane
-0.2
-0.4
-0.2
N.D.
N.D.
carbon source
D,L-Lactate (C)
+0.1
-0.3
-0.6
N.D.
N.D.
mixed community
Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane
-0.2
-0.2
-0.2
N.D.
N.D.
mixed community
Mixed culture; Methylosinus sp. DMC45 1:1 with Pseudomonas_DMC3_ML3; dNMS with methane
-0.1
-0.4
-0.2
N.D.
N.D.
carbon source
D-Glucose and casaminos (C)
+0.1
-0.0
-0.7
N.D.
N.D.
carbon source
D,L-Lactate (C)
+0.3
-0.3
-0.5
N.D.
N.D.
carbon source
D-Glucose and D,L-Lactate (C)
+0.1
-0.1
-0.4
N.D.
N.D.
carbon source
D-Glucose and casaminos (C)
+0.3
-0.0
-0.7
N.D.
N.D.
carbon source
D,L-Lactate and casaminos (C)
+0.2
-0.1
-0.5
N.D.
N.D.
carbon source
D,L-Lactate (C)
+0.3
-0.3
-0.4
N.D.
N.D.
carbon source
D,L-Lactate and casaminos (C)
+0.3
-0.2
-0.5
N.D.
N.D.
carbon source
D-Glucose (C)
+0.3
-0.4
-0.2
N.D.
N.D.
carbon source
D-Glucose (C)
+0.4
-0.3
-0.2
N.D.
N.D.
carbon source
D-Glucose (C)
+0.5
-0.3
-0.2
N.D.
N.D.
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