Fitness for 5 genes in Pseudomonas simiae WCS417

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500 ntPS417_02415 and PS417_02420 are separated by 123 nucleotidesPS417_02420 and PS417_02425 are separated by 15 nucleotidesPS417_02425 and PS417_02430 are separated by 57 nucleotidesPS417_02430 and PS417_02435 are separated by 166 nucleotides PS417_02415: PS417_02415 - phosphoserine phosphatase, at 553,413 to 554,627 _02415 PS417_02420: PS417_02420 - phosphatidylserine decarboxylase, at 554,751 to 555,611 _02420 PS417_02425: PS417_02425 - thiosulfate sulfurtransferase, at 555,627 to 556,442 _02425 PS417_02430: PS417_02430 - histidine kinase, at 556,500 to 558,035 _02430 PS417_02435: PS417_02435 - flagellar motor protein MotA, at 558,202 to 559,053 _02435
Group Condition PS417_02415 PS417_02420 PS417_02425 PS417_02430 PS417_02435
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.3 N.D. -0.6 -0.6 -2.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.6 N.D. -0.6 +0.2 -3.0
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.3 N.D. -0.6 -0.3 -2.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Asparagine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.0 N.D. -0.5 -0.1 -1.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Valine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.2 N.D. -0.8 -0.1 -1.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.3 N.D. -0.4 -0.0 -1.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.6 N.D. -0.7 +0.4 -1.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Serine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.3 N.D. -0.3 +0.4 -2.1
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.0 N.D. -0.6 +0.9 -1.6
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Alanine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.8 N.D. -0.6 -0.2 -1.3
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Histidine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -5.0 N.D. -0.6 +0.1 -0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Proline; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.5 N.D. -0.0 +0.7 -1.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Lysine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.9 N.D. -0.7 +0.3 -1.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Isoleucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -4.8 N.D. -0.6 +0.4 -0.3
nitrogen source Adenine (N) -3.0 N.D. -2.2 -0.3 +0.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.4 N.D. -0.4 +0.3 -1.5
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=casaminos; Chemical_conc=5mM; Distance=2cm; Sample=inner; Collection=outgrowth_in_LBkan50 -4.4 N.D. -0.7 +0.1 +0.4
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Tryptophan; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.3 N.D. -0.2 +0.6 -1.7
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Leucine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -3.6 N.D. -0.8 +0.5 -0.6
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -4.1 N.D. +1.1 +0.7 -0.4
soil soil sample 5; outgrowth in LB -3.3 N.D. -0.6 -0.1 +1.8
rhizosphere rhizosphere sample 1; outgrowth in LB -2.8 N.D. -0.5 -0.7 +2.0
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.7 N.D. +0.9 +0.8 +0.3
soil soil sample 4; outgrowth in LB -2.8 N.D. -0.4 -0.2 +2.0
soil soil sample 2; outgrowth in LB -2.7 N.D. +0.2 -0.5 +1.9
motility_chemotaxis Chemotaxis:Motility:: Method=Plug_approach; Chemical=L-Arginine; Chemical_conc=5mM; Distance=2cm; Sample=outer; Collection=outgrowth_in_LBkan50 -2.6 N.D. -0.4 +0.4 +1.9
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -3.0 N.D. +0.1 +0.5 +1.6
soil soil sample 8; outgrowth in LB -3.2 N.D. -0.3 +0.2 +2.8
rhizosphere rhizosphere sample 2; outgrowth in LB -2.3 N.D. -0.3 -0.1 +3.4
rhizosphere rhizosphere sample 8; outgrowth in LB -3.0 N.D. +0.2 -0.1 +4.2
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