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Cofit
Protein
Homologs
Fitness for 5 genes in
Sphingobium sp. HT1-2
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Top 18 experiments (either direction), sorted by average fitness
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500 nt
GFF473 and GFF474 are separated by 177 nucleotides
GFF474 and GFF475 overlap by 4 nucleotides
GFF475 and GFF476 are separated by 9 nucleotides
GFF476 and GFF477 are separated by 124 nucleotides
GFF473 - Chaperone protein DnaK, at 474,004 to 475,902
GFF473
GFF474 - Copper metallochaperone PCu(A)C, inserts Cu(I) into cytochrome oxidase subunit II, at 476,080 to 476,565
GFF474
GFF475 - hypothetical protein, at 476,562 to 477,026
GFF475
GFF476 - hypothetical protein, at 477,036 to 477,662
GFF476
GFF477 - Succinate dehydrogenase flavoprotein subunit (EC 1.3.5.1), at 477,787 to 479,601
GFF477
Group
Condition
GFF473
GFF474
GFF475
GFF476
GFF477
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.4
-0.2
-0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.1
-0.2
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
+0.0
+0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.0
-0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
-0.3
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.2
-0.1
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.0
-0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
-0.3
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
-0.2
+0.2
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.0
+0.1
-0.0
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
-0.0
+0.0
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
-0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Putrescine
N.D.
+0.2
-0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with D-Glucose and Ammonium Sulfate
N.D.
+0.0
+0.1
+0.1
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.3
-0.2
+0.2
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
-0.2
+0.2
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.1
+0.2
+0.3
N.D.
carbon and nitrogen source
EMM_noCarbon with Sucrose and Ammonium Sulfate
N.D.
+0.3
+0.2
+0.1
N.D.
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