Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4738 and GFF4739 are separated by 79 nucleotidesGFF4739 and GFF4740 are separated by 88 nucleotidesGFF4740 and GFF4741 are separated by 153 nucleotidesGFF4741 and GFF4742 are separated by 122 nucleotides GFF4738 - Response regulator NasT, at 104,559 to 105,875 GFF4738 GFF4739 - N(6)-L-threonylcarbamoyladenine synthase (EC 2.3.1.234), at 105,955 to 107,013 GFF4739 GFF4740 - no description, at 107,102 to 107,746 GFF4740 GFF4741 - Small heat shock protein, at 107,900 to 108,271 GFF4741 GFF4742 - ABC transporter, substrate-binding protein RSc1750, at 108,394 to 109,674 GFF4742
Group Condition GFF4738 GFF4739 GFF4740 GFF4741 GFF4742
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.1 -1.4 +0.2
complex community Community=guar; Passage=4 N.D. N.D. -0.1 -0.8 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.2 -0.3 -0.1
no phage control no phage control N.D. N.D. +0.0 -0.4 -0.1
phage phage_bap4 N.D. N.D. +0.0 -0.4 +0.1
complex community Community=guar; Passage=4 N.D. N.D. +0.3 -0.6 -0.0
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL N.D. N.D. -0.1 -0.3 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.1 -0.3 +0.1
phage phage_bap4 N.D. N.D. +0.1 -0.5 +0.1
complex community Community=Kojac gum; Passage=4 N.D. N.D. +0.0 +0.2 -0.3
complex community Community=guar; Passage=4 N.D. N.D. +0.0 +0.3 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. -0.1 +0.3 +0.0
complex community Community=arabino-guar; Passage=4 N.D. N.D. -0.0 +0.4 -0.1
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.1 -0.1 +0.3
complex community Community=arabino-guar; Passage=4 N.D. N.D. +0.1 +0.3 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL N.D. N.D. -0.1 +0.4 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.1 +0.2 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.0 +0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.1 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.1 +0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL N.D. N.D. +0.0 +0.3 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. -0.0 +0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.1 +0.5 +0.0
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. +0.1 +0.3 +0.1
vitamin M9 with Supernatant from Cyptococcus N.D. N.D. -0.0 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.1 +0.4 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.0 +0.5 +0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL N.D. N.D. +0.0 +0.5 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL N.D. N.D. +0.1 +0.5 +0.3
complex community Community=Locust bean gum; Passage=4 N.D. N.D. +0.2 +0.7 +0.0
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