Fitness for 5 genes in Variovorax sp. SCN45

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500 ntGFF4731 and GFF4732 are separated by 48 nucleotidesGFF4732 and GFF4733 are separated by 9 nucleotidesGFF4733 and GFF4734 overlap by 4 nucleotidesGFF4734 and GFF4735 are separated by 24 nucleotides GFF4731 - Assimilatory nitrate reductase large subunit (EC 1.7.99.4), at 94,717 to 97,509 GFF4731 GFF4732 - Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4), at 97,558 to 97,953 GFF4732 GFF4733 - Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family), at 97,963 to 98,754 GFF4733 GFF4734 - Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4), at 98,751 to 101,219 GFF4734 GFF4735 - Nitrate ABC transporter, ATP-binding protein, at 101,244 to 102,053 GFF4735
Group Condition GFF4731 GFF4732 GFF4733 GFF4734 GFF4735
complex community Community=guar; Passage=4 +0.0 N.D. -0.6 -0.4 -0.9
complex community Community=guar; Passage=4 -0.1 N.D. -1.3 -0.1 +0.4
complex community Community=arabino-guar; Passage=4 +0.7 N.D. -1.4 -0.1 -0.1
phage phage_bap4 -0.1 N.D. -0.2 -0.3 -0.1
phage phage_bap4 +0.0 N.D. -0.4 -0.1 -0.1
vitamin M9 with Supernatant from Cyptococcus +0.0 N.D. -0.4 -0.0 -0.2
phage phage_bap4 -0.1 N.D. -0.2 -0.1 -0.2
complex community Community=arabino-guar; Passage=4 +0.0 N.D. -0.6 +0.1 -0.1
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. -0.5 +0.2 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.1 N.D. -0.1 -0.1 -0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 2 mg/mL +0.0 N.D. -0.3 +0.0 -0.2
complex community Community=arabino-guar; Passage=4 +0.3 N.D. -1.1 -0.1 +0.6
complex community Community=guar; Passage=4 -0.1 N.D. -0.2 -0.1 +0.2
phage phage_bap4 +0.1 N.D. -0.1 +0.0 -0.3
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. +0.1 -0.1 -0.4
complex community Community=Locust bean gum; Passage=4 +0.3 N.D. -0.4 -0.1 +0.2
vitamin M9 with Supernatant from Cyptococcus and thiamine HCl 10 mg/mL +0.2 N.D. +0.2 -0.1 -0.2
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.1 N.D. -0.2 -0.0 +0.3
complex community Community=arabino-guar; Passage=4 +0.1 N.D. +0.2 -0.3 +0.2
vitamin M9 with Supernatant from Cyptococcus +0.1 N.D. -0.1 -0.1 +0.4
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 10 mg/mL +0.0 N.D. +0.4 -0.0 -0.1
complex community Community=Locust bean gum; Passage=4 -0.3 N.D. +0.3 +0.2 +0.1
vitamin M9 with Supernatant from Cyptococcus +0.2 N.D. -0.1 +0.1 +0.2
complex community Community=guar; Passage=4 -0.0 N.D. +0.3 -0.1 +0.2
vitamin M9 with calcium pantothenate 10 mg/mL +0.1 N.D. +0.1 -0.1 +0.3
complex community Community=Kojac gum; Passage=4 +0.2 N.D. +0.3 +0.3 -0.3
vitamin M9 with Supernatant from Cyptococcus and calcium pantothenate 10 mg/mL +0.2 N.D. +0.1 -0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.0 N.D. +0.5 +0.0 -0.0
complex community Community=Locust bean gum; Passage=4 -0.1 N.D. +0.3 +0.1 +0.3
vitamin M9 with calcium pantothenate 10 mg/mL and thiamine HCl 50 mg/mL +0.2 N.D. +0.0 +0.1 +0.3
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